RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 TBC1D8O95759 1140 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 ABL1P00519 1130 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 P4HBP07237 508 aaKnown RBP10.64□□□□□ -0.71
RTF1-206ENST00000560447 CCDC172P0C7W6 258 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 HOXD13P35453 343 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 OAZ1P54368 228 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 MCCD1P59942 119 aaPredicted RBP10.64□□□□□ -0.71
RTF1-206ENST00000560447 RASA3Q14644 834 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 ASIC2Q16515 512 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 EXOC3L4Q17RC7 722 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 POTEAQ6S8J7 498 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 HDXQ7Z353 690 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 VPS36Q86VN1 386 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 CCDC125Q86Z20 511 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 SMCR8Q8TEV9 937 aaPredicted RBP10.64□□□□□ -0.71
RTF1-206ENST00000560447 BBXQ8WY36 941 aaPredicted RBP10.64□□□□□ -0.71
RTF1-206ENST00000560447 HVCN1Q96D96 273 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 CALR3Q96L12 384 aaKnown RBP10.64□□□□□ -0.71
RTF1-206ENST00000560447 C12orf42Q96LP6 360 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 TEPSINQ96N21 525 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 NOX5Q96PH1 765 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 IWS1Q96ST2 819 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 STRA6Q9BX79 667 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 FGFBP2Q9BYJ0 223 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 UNC45AQ9H3U1 944 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 ZHX3Q9H4I2 956 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 ZSWIM4Q9H7M6 989 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 VIPAS39Q9H9C1 493 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 JADE2Q9NQC1 790 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 DMAC2Q9NW81 257 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 TBC1D7Q9P0N9 293 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 RGS17Q9UGC6 210 aaPredicted RBP10.64□□□□□ -0.71
RTF1-206ENST00000560447 PUF60Q9UHX1 559 aaKnown RBP10.64□□□□□ -0.71
RTF1-206ENST00000560447 MYH10P35580 1976 aa10.64□□□□□ -0.71
RTF1-206ENST00000560447 DICER1Q9UPY3 1922 aaKnown RBP10.63□□□□□ -0.71
RTF1-206ENST00000560447 ARHGEF35A5YM69 484 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 RCCD1A6NED2 376 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 P4HA2O15460 535 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 MAFGO15525 162 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 DKC1O60832 514 aaKnown RBP eCLIP10.63□□□□□ -0.71
RTF1-206ENST00000560447 N4BP1O75113 896 aaKnown RBP10.63□□□□□ -0.71
RTF1-206ENST00000560447 ZBED4O75132 1171 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 PRPF6O94906 941 aaKnown RBP10.63□□□□□ -0.71
RTF1-206ENST00000560447 ATP1A1P05023 1023 aaKnown RBP10.63□□□□□ -0.71
RTF1-206ENST00000560447 MYBP10242 640 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 FERP16591 822 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 POLD1P28340 1107 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 SFNP31947 248 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 ABCD1P33897 745 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 CASP5P51878 434 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 JAK3P52333 1124 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 POLR2FP61218 127 aaKnown RBP10.63□□□□□ -0.71
RTF1-206ENST00000560447 CYP4A11Q02928 519 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 ENPEPQ07075 957 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 DMTNQ08495 405 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 KLHL30Q0D2K2 578 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 LONRF2Q1L5Z9 754 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 TKFCQ3LXA3 575 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 TDRD12Q587J7 1177 aaKnown RBP10.63□□□□□ -0.71
RTF1-206ENST00000560447 KLHDC7AQ5VTJ3 777 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 DPY19L2P1Q6NXN4 242 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 ZNF720Q7Z2F6 126 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 MIER3Q7Z3K6 550 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 TPH2Q8IWU9 490 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 FAM178BQ8IXR5 827 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 MMGT1Q8N4V1 131 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 MYCT1Q8N699 235 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 CYP2W1Q8TAV3 490 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 CLEC4DQ8WXI8 215 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 EEF2KMTQ96G04 330 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 BORCS6Q96GS4 357 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 FUT8Q9BYC5 575 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 ZNF341Q9BYN7 854 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 TMEM206Q9H813 350 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 RGL1Q9NZL6 768 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 LARSQ9P2J5 1176 aaKnown RBP10.63□□□□□ -0.71
RTF1-206ENST00000560447 ZNF112Q9UJU3 913 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 PPP1R9AQ9ULJ8 1098 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 PPP2R3BQ9Y5P8 575 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 ZMYM2Q9UBW7 1377 aa10.63□□□□□ -0.71
RTF1-206ENST00000560447 RLFQ13129 1914 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 A0A0A6YYK5 440 aaPredicted RBP10.62□□□□□ -0.71
RTF1-206ENST00000560447 GRID2IPA4D2P6 1211 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 NKRFO15226 690 aaKnown RBP eCLIP10.62□□□□□ -0.71
RTF1-206ENST00000560447 PMM2O15305 246 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 TGFB1I1O43294 461 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 TLR2O60603 784 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 ARP10275 920 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 UCHL3P15374 230 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 SCP2P22307 547 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 INPP5BP32019 993 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 PLA2G4AP47712 749 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 KRT76Q01546 638 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 CYP27A1Q02318 531 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 RAPGEF1Q13905 1077 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 CTTNQ14247 550 aaKnown RBP10.62□□□□□ -0.71
RTF1-206ENST00000560447 NAB2Q15742 525 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 NBPF9Q3BBW0 867 aa10.62□□□□□ -0.71
RTF1-206ENST00000560447 GLE1Q53GS7 698 aaKnown RBP10.62□□□□□ -0.71
RTF1-206ENST00000560447 BEND6Q5SZJ8 279 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms