RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 PPP2R3AQ06190 1150 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 BMT2Q1RMZ1 405 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 PDXDC1Q6P996 788 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 ZC3H3Q8IXZ2 948 aaKnown RBP15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 ZNF526Q8TF50 670 aaPredicted RBP15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 JAKMIP2Q96AA8 810 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 DRC1Q96MC2 740 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 TBC1D22BQ9NU19 505 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 AJAP1Q9UKB5 411 aaPredicted RBP15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 ADAMTS5Q9UNA0 930 aa15.46■□□□□ 0.07
CARMIL3-203ENST00000560349 MYH11P35749 1972 aa15.46■□□□□ 0.06
CARMIL3-203ENST00000560349 DNAH12Q6ZR08 3092 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 AKR1B10O60218 316 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 GNA14O95837 355 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 ZNF131P52739 623 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 BMS1Q14692 1282 aaKnown RBP15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 EAPPQ56P03 285 aaPredicted RBP15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 TEX35Q5T0J7 233 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 FAM102BQ5T8I3 360 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 ANKRD35Q8N283 1001 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 NSUN6Q8TEA1 469 aaKnown RBP15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 UBXN4Q92575 508 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 GABBR1Q9UBS5 961 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 WDR64B1ANS9 1081 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 ZNF862O60290 1169 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 TADA3O75528 432 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 IPO7O95373 1038 aaKnown RBP15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 EPB41P11171 864 aaKnown RBP15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 MARSP56192 900 aaKnown RBP15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 PEX3P56589 373 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 SP2Q02086 613 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 ANO5Q75V66 913 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 NIPA1Q7RTP0 329 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 TEX2Q8IWB9 1127 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 SLC35C1Q96A29 364 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 MLXIPQ9HAP2 919 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 AGPAT3Q9NRZ7 376 aa15.45■□□□□ 0.06
CARMIL3-203ENST00000560349 SLC16A4O15374 487 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 PPP1R12BO60237 982 aaPredicted RBP15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 SRGAP2O75044 1071 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 AFPP02771 609 aaKnown RBP15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 GUCY2CP25092 1073 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 NOL9Q5SY16 702 aaKnown RBP15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 SWSAP1Q6NVH7 229 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 SEPT14Q6ZU15 432 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 FAM186BQ8IYM0 893 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 PPP2R3BQ9Y5P8 575 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 CTAGE9A4FU28 777 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 HGSNATQ68CP4 663 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 NCAPG2Q86XI2 1143 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 INPP4AQ96PE3 977 aaPredicted RBP15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 IFIH1Q9BYX4 1025 aaKnown RBP15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 GBP3Q9H0R5 595 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 HOXC10Q9NYD6 342 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 GCNT4Q9P109 453 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 ODF2LQ9ULJ1 636 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 KIAA1217Q5T5P2 1943 aa15.44■□□□□ 0.06
CARMIL3-203ENST00000560349 LRRN2O75325 713 aa15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 ZRANB2O95218 330 aaKnown RBP eCLIP15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 KCNA2P16389 499 aa15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 FOXR2Q6PJQ5 311 aa15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 CCDC60Q8IWA6 550 aaPredicted RBP15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 CBWD1Q9BRT8 395 aa15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 USP20Q9Y2K6 914 aa15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 DICER1Q9UPY3 1922 aaKnown RBP15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 EIF3CLB5ME19 914 aaKnown RBP15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 ATP1A1P05023 1023 aaKnown RBP15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 RPL13P26373 211 aaKnown RBP15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 SPA17Q15506 151 aa15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 EXOC3L4Q17RC7 722 aa15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 CYFIP1Q7L576 1253 aa15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 HS2ST1Q7LGA3 356 aa15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 FRMD5Q7Z6J6 570 aa15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 ZBTB9Q96C00 473 aa15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 EIF3CQ99613 913 aaKnown RBP15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 GANQ9H2C0 597 aa15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 CEP72Q9P209 647 aa15.43■□□□□ 0.06
CARMIL3-203ENST00000560349 BRCA2P51587 3418 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 CCDC169A6NNP5 214 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 EIF3DO15371 548 aaKnown RBP eCLIP15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 FDX1P10109 184 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 PON1P27169 355 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 PLA2G4AP47712 749 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 PSMC5P62195 406 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 KRT83P78385 493 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 CBWD6Q4V339 395 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 CBWD3Q5JTY5 395 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 CBWD5Q5RIA9 395 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 NEK9Q8TD19 979 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 CDCA5Q96FF9 252 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 PSMB7Q99436 277 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 NAPGQ99747 312 aaPredicted RBP15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 ZNF408Q9H9D4 720 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 MAP3K20Q9NYL2 800 aaKnown RBP15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 CAPN6Q9Y6Q1 641 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 GOLGA8IPA6NC78 632 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 GOLGA8JA6NMD2 632 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 EFCAB8A8MWE9 144 aa15.42■□□□□ 0.06
CARMIL3-203ENST00000560349 EXOC3O60645 756 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms