RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 UBE3AQ05086 875 aa23.23■■□□□ 1.31
PSEN1-225ENST00000560005 TROAPQ12815 778 aa23.23■■□□□ 1.31
PSEN1-225ENST00000560005 NFKBIBQ15653 356 aa23.23■■□□□ 1.31
PSEN1-225ENST00000560005 ZBTB33Q86T24 672 aa23.23■■□□□ 1.31
PSEN1-225ENST00000560005 WASF1Q92558 559 aa23.23■■□□□ 1.31
PSEN1-225ENST00000560005 CDHR1Q96JP9 859 aa23.23■■□□□ 1.31
PSEN1-225ENST00000560005 TMX1Q9H3N1 280 aa23.23■■□□□ 1.31
PSEN1-225ENST00000560005 NCOA5Q9HCD5 579 aaKnown RBP23.23■■□□□ 1.31
PSEN1-225ENST00000560005 PCDHB12Q9Y5F1 795 aa23.23■■□□□ 1.31
PSEN1-225ENST00000560005 IGSF9BQ9UPX0 1349 aa23.23■■□□□ 1.31
PSEN1-225ENST00000560005 PLXNA3P51805 1871 aa23.23■■□□□ 1.31
PSEN1-225ENST00000560005 LOXHD1Q8IVV2 1947 aa23.23■■□□□ 1.31
PSEN1-225ENST00000560005 VPS13AQ96RL7 3174 aa23.23■■□□□ 1.31
PSEN1-225ENST00000560005 RRN3P2A6NIE6 340 aa23.22■■□□□ 1.31
PSEN1-225ENST00000560005 PIK3CDO00329 1044 aa23.22■■□□□ 1.31
PSEN1-225ENST00000560005 CTDNEP1O95476 244 aa23.22■■□□□ 1.31
PSEN1-225ENST00000560005 ITGB5P18084 799 aa23.22■■□□□ 1.31
PSEN1-225ENST00000560005 SP100P23497 879 aaPredicted RBP23.22■■□□□ 1.31
PSEN1-225ENST00000560005 KIF5BP33176 963 aa23.22■■□□□ 1.31
PSEN1-225ENST00000560005 ERVFC1P60507 584 aa23.22■■□□□ 1.31
PSEN1-225ENST00000560005 FOXK2Q01167 660 aa23.22■■□□□ 1.31
PSEN1-225ENST00000560005 TRIM22Q8IYM9 498 aa23.22■■□□□ 1.31
PSEN1-225ENST00000560005 CDCA3Q99618 268 aaPredicted RBP23.22■■□□□ 1.31
PSEN1-225ENST00000560005 DDX11L8A8MPP1 907 aa23.21■■□□□ 1.31
PSEN1-225ENST00000560005 H3BQV1 296 aa23.21■■□□□ 1.31
PSEN1-225ENST00000560005 FGF18O76093 207 aa23.21■■□□□ 1.31
PSEN1-225ENST00000560005 IFNAR1P17181 557 aa23.21■■□□□ 1.31
PSEN1-225ENST00000560005 GNAQP50148 359 aa23.21■■□□□ 1.31
PSEN1-225ENST00000560005 TMEM266Q2M3C6 531 aa23.21■■□□□ 1.31
PSEN1-225ENST00000560005 CTCFLQ8NI51 663 aaPredicted RBP23.21■■□□□ 1.31
PSEN1-225ENST00000560005 RIPOR3Q96MK2 946 aa23.21■■□□□ 1.31
PSEN1-225ENST00000560005 APOL5Q9BWW9 433 aa23.21■■□□□ 1.31
PSEN1-225ENST00000560005 CELF4Q9BZC1 486 aaKnown RBP23.21■■□□□ 1.31
PSEN1-225ENST00000560005 AAASQ9NRG9 546 aa23.21■■□□□ 1.31
PSEN1-225ENST00000560005 STK36Q9NRP7 1315 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 FSD2A1L4K1 749 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 JAK2O60674 1132 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 SARSP49591 514 aaKnown RBP23.2■■□□□ 1.3
PSEN1-225ENST00000560005 SSRP1Q08945 709 aaKnown RBP23.2■■□□□ 1.3
PSEN1-225ENST00000560005 MTMR1Q13613 665 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 ASCL5Q7RTU5 278 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 THNSL1Q8IYQ7 743 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 TRAPPC12Q8WVT3 735 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 PCYT2Q99447 389 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 S1PR5Q9H228 398 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 ORC3Q9UBD5 711 aaPredicted RBP23.2■■□□□ 1.3
PSEN1-225ENST00000560005 HCSTQ9UBK5 93 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 TRPC6Q9Y210 931 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 ZDHHC9Q9Y397 364 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 PCDHB7Q9Y5E2 793 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 PCDHA2Q9Y5H9 948 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 FAM186AA6NE01 2351 aa23.2■■□□□ 1.3
PSEN1-225ENST00000560005 TBKBP1A7MCY6 615 aa23.19■■□□□ 1.3
PSEN1-225ENST00000560005 PROB1E7EW31 1015 aa23.19■■□□□ 1.3
PSEN1-225ENST00000560005 GALR2O43603 387 aaPredicted RBP23.19■■□□□ 1.3
PSEN1-225ENST00000560005 SRGAP2BP0DMP2 458 aa23.19■■□□□ 1.3
PSEN1-225ENST00000560005 ADD1P35611 737 aaKnown RBP23.19■■□□□ 1.3
PSEN1-225ENST00000560005 TECP42680 631 aa23.19■■□□□ 1.3
PSEN1-225ENST00000560005 NFX1Q12986 1120 aaKnown RBP23.19■■□□□ 1.3
PSEN1-225ENST00000560005 ANKRD54Q6NXT1 300 aa23.19■■□□□ 1.3
PSEN1-225ENST00000560005 TMEM260Q9NX78 707 aa23.19■■□□□ 1.3
PSEN1-225ENST00000560005 FNDC1Q4ZHG4 1894 aaPredicted RBP23.18■■□□□ 1.3
PSEN1-225ENST00000560005 FSCN2O14926 492 aa23.18■■□□□ 1.3
PSEN1-225ENST00000560005 MGEA5O60502 916 aa23.18■■□□□ 1.3
PSEN1-225ENST00000560005 F13A1P00488 732 aa23.18■■□□□ 1.3
PSEN1-225ENST00000560005 MCM4P33991 863 aa23.18■■□□□ 1.3
PSEN1-225ENST00000560005 NUBP1P53384 320 aa23.18■■□□□ 1.3
PSEN1-225ENST00000560005 KRT76Q01546 638 aa23.18■■□□□ 1.3
PSEN1-225ENST00000560005 FAM102BQ5T8I3 360 aa23.18■■□□□ 1.3
PSEN1-225ENST00000560005 PLPP4Q5VZY2 271 aa23.18■■□□□ 1.3
PSEN1-225ENST00000560005 SYCE2Q6PIF2 218 aa23.18■■□□□ 1.3
PSEN1-225ENST00000560005 TMEM184AQ6ZMB5 413 aa23.18■■□□□ 1.3
PSEN1-225ENST00000560005 RRP36Q96EU6 259 aaKnown RBP23.18■■□□□ 1.3
PSEN1-225ENST00000560005 LZTS2Q9BRK4 669 aa23.18■■□□□ 1.3
PSEN1-225ENST00000560005 AZI2Q9H6S1 392 aa23.18■■□□□ 1.3
PSEN1-225ENST00000560005 MTMR6Q9Y217 621 aa23.18■■□□□ 1.3
PSEN1-225ENST00000560005 KDM3AQ9Y4C1 1321 aa23.17■■□□□ 1.3
PSEN1-225ENST00000560005 VPS37CA5D8V6 355 aaPredicted RBP23.17■■□□□ 1.3
PSEN1-225ENST00000560005 CDC27P30260 824 aa23.17■■□□□ 1.3
PSEN1-225ENST00000560005 AKAP17AQ02040 695 aaKnown RBP23.17■■□□□ 1.3
PSEN1-225ENST00000560005 PKP1Q13835 747 aa23.17■■□□□ 1.3
PSEN1-225ENST00000560005 KCNC3Q14003 757 aa23.17■■□□□ 1.3
PSEN1-225ENST00000560005 NTRK3Q16288 839 aa23.17■■□□□ 1.3
PSEN1-225ENST00000560005 PDE12Q6L8Q7 609 aaKnown RBP23.17■■□□□ 1.3
PSEN1-225ENST00000560005 LLGL2Q6P1M3 1020 aa23.17■■□□□ 1.3
PSEN1-225ENST00000560005 COLGALT1Q8NBJ5 622 aa23.17■■□□□ 1.3
PSEN1-225ENST00000560005 KREMEN2Q8NCW0 462 aa23.17■■□□□ 1.3
PSEN1-225ENST00000560005 ZSCAN16Q9H4T2 348 aaPredicted RBP23.17■■□□□ 1.3
PSEN1-225ENST00000560005 JPH1Q9HDC5 661 aaPredicted RBP23.17■■□□□ 1.3
PSEN1-225ENST00000560005 FAM217BQ9NTX9 383 aaPredicted RBP23.17■■□□□ 1.3
PSEN1-225ENST00000560005 TYW1Q9NV66 732 aaKnown RBP23.17■■□□□ 1.3
PSEN1-225ENST00000560005 GINS2Q9Y248 185 aa23.17■■□□□ 1.3
PSEN1-225ENST00000560005 UBIAD1Q9Y5Z9 338 aa23.17■■□□□ 1.3
PSEN1-225ENST00000560005 DCHS1Q96JQ0 3298 aa23.17■■□□□ 1.3
PSEN1-225ENST00000560005 BAG4O95429 457 aaKnown RBP23.16■■□□□ 1.3
PSEN1-225ENST00000560005 PLCB4Q15147 1175 aa23.16■■□□□ 1.3
PSEN1-225ENST00000560005 MYL10Q9BUA6 226 aa23.16■■□□□ 1.3
PSEN1-225ENST00000560005 SPZ1Q9BXG8 430 aa23.16■■□□□ 1.3
PSEN1-225ENST00000560005 ERVK-5Q9HDB9 667 aa23.16■■□□□ 1.3
PSEN1-225ENST00000560005 SEC63Q9UGP8 760 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms