RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 PLAGL2Q9UPG8 496 aa13.84□□□□□ -0.19
SPG11-219ENST00000559822 AKT3Q9Y243 479 aa13.84□□□□□ -0.19
SPG11-219ENST00000559822 EVPLQ92817 2033 aa13.84□□□□□ -0.19
SPG11-219ENST00000559822 CYP3A7-CYP3A51PA0A087WV96 503 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 H3BQ06 376 aaPredicted RBP13.83□□□□□ -0.2
SPG11-219ENST00000559822 HOXA2O43364 376 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 CHMP2AO43633 222 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 GPR32O75388 356 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 VTNP04004 478 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 CYP3A7P24462 503 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 CLCN3P51790 818 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 TBC1D8BQ0IIM8 1120 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 STK3Q13188 491 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 NONOQ15233 471 aaKnown RBP eCLIP13.83□□□□□ -0.2
SPG11-219ENST00000559822 CSPP1Q1MSJ5 1256 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 SPOUT1Q5T280 376 aaKnown RBP13.83□□□□□ -0.2
SPG11-219ENST00000559822 EFCAB12Q6NXP0 572 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 KRT25Q7Z3Z0 450 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 FAM178BQ8IXR5 827 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 TMEM40Q8WWA1 233 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 ELAC1Q9H777 363 aaKnown RBP13.83□□□□□ -0.2
SPG11-219ENST00000559822 CDHR5Q9HBB8 845 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 ATP6V0A4Q9HBG4 840 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 ALG13Q9NP73 1137 aaKnown RBP13.83□□□□□ -0.2
SPG11-219ENST00000559822 TMEM161AQ9NX61 479 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 PCDHB12Q9Y5F1 795 aa13.83□□□□□ -0.2
SPG11-219ENST00000559822 C9IYK1 514 aa13.82□□□□□ -0.2
SPG11-219ENST00000559822 EIF5BO60841 1220 aaKnown RBP13.82□□□□□ -0.2
SPG11-219ENST00000559822 PSMD10O75832 226 aa13.82□□□□□ -0.2
SPG11-219ENST00000559822 IL9P15248 144 aa13.82□□□□□ -0.2
SPG11-219ENST00000559822 ZSCAN20P17040 1043 aaPredicted RBP13.82□□□□□ -0.2
SPG11-219ENST00000559822 IBSPP21815 317 aaPredicted RBP13.82□□□□□ -0.2
SPG11-219ENST00000559822 SSTR3P32745 418 aaPredicted RBP13.82□□□□□ -0.2
SPG11-219ENST00000559822 NLRP11P59045 1033 aaKnown RBP13.82□□□□□ -0.2
SPG11-219ENST00000559822 CDC42EP1Q00587 391 aa13.82□□□□□ -0.2
SPG11-219ENST00000559822 UBE3AQ05086 875 aa13.82□□□□□ -0.2
SPG11-219ENST00000559822 CTC1Q2NKJ3 1217 aa13.82□□□□□ -0.2
SPG11-219ENST00000559822 MIER3Q7Z3K6 550 aa13.82□□□□□ -0.2
SPG11-219ENST00000559822 FAM228AQ86W67 206 aa13.82□□□□□ -0.2
SPG11-219ENST00000559822 GJD3Q8N144 294 aa13.82□□□□□ -0.2
SPG11-219ENST00000559822 SCLT1Q96NL6 688 aa13.82□□□□□ -0.2
SPG11-219ENST00000559822 PPP1R16BQ96T49 567 aa13.82□□□□□ -0.2
SPG11-219ENST00000559822 SLKQ9H2G2 1235 aaPredicted RBP13.82□□□□□ -0.2
SPG11-219ENST00000559822 UNC45AQ9H3U1 944 aa13.82□□□□□ -0.2
SPG11-219ENST00000559822 PRKAG3Q9UGI9 489 aa13.82□□□□□ -0.2
SPG11-219ENST00000559822 KIAA1671Q9BY89 1806 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 CCDC194A0A1B0GVG4 234 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 FSD2A1L4K1 749 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 TBKBP1A7MCY6 615 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 M0R2N6 131 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 ZNF862O60290 1169 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 MGEA5O60502 916 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 ITGB1P05556 798 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 EIF4BP23588 611 aaKnown RBP13.81□□□□□ -0.2
SPG11-219ENST00000559822 ANAPC15P60006 121 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 HYAL1Q12794 435 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 ANKRD1Q15327 319 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 XKR3Q5GH77 459 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 TMEM31Q5JXX7 168 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 LRRC71Q8N4P6 559 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 LINC01465Q8N7H1 131 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 KLHL23Q8NBE8 558 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 SPPL3Q8TCT6 385 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 MBOAT7Q96N66 472 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 NAP1L4Q99733 375 aaKnown RBP13.81□□□□□ -0.2
SPG11-219ENST00000559822 SEPT9Q9UHD8 586 aaPredicted RBP13.81□□□□□ -0.2
SPG11-219ENST00000559822 DDX25Q9UHL0 483 aaKnown RBP13.81□□□□□ -0.2
SPG11-219ENST00000559822 WDR81Q562E7 1941 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 STK36Q9NRP7 1315 aa13.81□□□□□ -0.2
SPG11-219ENST00000559822 EDIL3O43854 480 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 DKC1O60832 514 aaKnown RBP eCLIP13.8□□□□□ -0.2
SPG11-219ENST00000559822 TDP2O95551 362 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 GCFC2P16383 781 aaKnown RBP13.8□□□□□ -0.2
SPG11-219ENST00000559822 LAG3P18627 525 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 GATMP50440 423 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 DNM2P50570 870 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 GPC3P51654 580 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 FAM189BP81408 668 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 DSC3Q14574 896 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 ABI1Q8IZP0 508 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 POF1BQ8WVV4 589 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 WASF1Q92558 559 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 POP1Q99575 1024 aaKnown RBP13.8□□□□□ -0.2
SPG11-219ENST00000559822 JPH2Q9BR39 696 aaPredicted RBP13.8□□□□□ -0.2
SPG11-219ENST00000559822 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
SPG11-219ENST00000559822 NIFKQ9BYG3 293 aaKnown RBP13.8□□□□□ -0.2
SPG11-219ENST00000559822 TMEM117Q9H0C3 514 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 ADAMTS10Q9H324 1103 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 EPHX3Q9H6B9 360 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 ATG2AQ2TAZ0 1938 aa13.8□□□□□ -0.2
SPG11-219ENST00000559822 MYO7AQ13402 2215 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 FNDC1Q4ZHG4 1894 aaPredicted RBP13.79□□□□□ -0.2
SPG11-219ENST00000559822 PI4K2BG5E9Z4 385 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 CSPG5O95196 566 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 ALADP13716 330 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 DARSP14868 501 aaKnown RBP13.79□□□□□ -0.2
SPG11-219ENST00000559822 LTBRP36941 435 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 NDUFV1P49821 464 aa13.79□□□□□ -0.2
SPG11-219ENST00000559822 SMAD4Q13485 552 aaKnown RBP13.79□□□□□ -0.2
SPG11-219ENST00000559822 CAMK1Q14012 370 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms