RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 ASAP2O43150 1006 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 ZNF202O95125 648 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 PARNO95453 639 aaKnown RBP9.66□□□□□ -0.86
LRRC28-215ENST00000559774 NDUFA8P51970 172 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 POLGP54098 1239 aaPredicted RBP9.66□□□□□ -0.86
LRRC28-215ENST00000559774 RTP1P59025 263 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 POU5F1BQ06416 359 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 SNW1Q13573 536 aaKnown RBP9.66□□□□□ -0.86
LRRC28-215ENST00000559774 MXD4Q14582 209 aaPredicted RBP9.66□□□□□ -0.86
LRRC28-215ENST00000559774 ZRSR1Q15695 479 aaKnown RBP9.66□□□□□ -0.86
LRRC28-215ENST00000559774 PTGISQ16647 500 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 MTERF2Q49AM1 385 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 FAM47CQ5HY64 1035 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 IER5Q5VY09 327 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 GDF6Q6KF10 455 aaPredicted RBP9.66□□□□□ -0.86
LRRC28-215ENST00000559774 RINT1Q6NUQ1 792 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 PADI6Q6TGC4 694 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 C1orf186Q6ZWK4 172 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 KCNK18Q7Z418 384 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 FAM126BQ8IXS8 530 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 CEP57L1Q8IYX8 460 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 FMR1NBQ8N0W7 255 aaPredicted RBP9.66□□□□□ -0.86
LRRC28-215ENST00000559774 CCDC155Q8N6L0 562 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 LINC01465Q8N7H1 131 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 CAGE1Q8TC20 777 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 KIFAP3Q92845 792 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 ATP6V0A4Q9HBG4 840 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 LMBRD1Q9NUN5 540 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 HOOK1Q9UJC3 728 aaKnown RBP9.66□□□□□ -0.86
LRRC28-215ENST00000559774 ODF2LQ9ULJ1 636 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 NOD1Q9Y239 953 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 FRMPD3Q5JV73 1810 aa9.66□□□□□ -0.86
LRRC28-215ENST00000559774 A0A087X0B3 334 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 PITPNM1O00562 1244 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 ACTN4O43707 911 aaKnown RBP9.65□□□□□ -0.86
LRRC28-215ENST00000559774 B4GALT4O60513 344 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 MBD3O95983 291 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 ABCD1P33897 745 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 MCM4P33991 863 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 NPEPPSP55786 919 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 BFSP2Q13515 415 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 EMC2Q15006 297 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 PCBP1Q15365 356 aaKnown RBP eCLIP9.65□□□□□ -0.86
LRRC28-215ENST00000559774 PLA2G4FQ68DD2 849 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 EFCAB12Q6NXP0 572 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 KRBA2Q6ZNG9 492 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 SH3RF1Q7Z6J0 888 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 PDILTQ8N807 584 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 SLC17A8Q8NDX2 589 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 KCNN1Q92952 543 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 DHX58Q96C10 678 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 DRC1Q96MC2 740 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 MAP7D2Q96T17 732 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 MTRQ99707 1265 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 PANK2Q9BZ23 570 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 GOLPH3LQ9H4A5 285 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 SQORQ9Y6N5 450 aa9.65□□□□□ -0.86
LRRC28-215ENST00000559774 PHLPP2Q6ZVD8 1323 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 PVALEFA0A1B0GWK0 134 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 TREHO43280 583 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 KINO60870 393 aaKnown RBP9.64□□□□□ -0.87
LRRC28-215ENST00000559774 GADD45BO75293 160 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-215ENST00000559774 CLTBP09497 229 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 CYP2C9P11712 490 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 ATN1P54259 1190 aaPredicted RBP9.64□□□□□ -0.87
LRRC28-215ENST00000559774 CHMP4BP1P59074 171 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 IGBP1P78318 339 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 TLE2Q04725 743 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 FAAP100Q0VG06 881 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 MCM6Q14566 821 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 PPP2R5AQ15172 486 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 LRRC26Q2I0M4 334 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 TRIM60Q495X7 471 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 LONRF3Q496Y0 759 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 FAM26DQ5JW98 314 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 ZNF410Q86VK4 478 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 GPBP1Q86WP2 473 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 KIAA0319LQ8IZA0 1049 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 METTL13Q8N6R0 699 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 CNNM3Q8NE01 707 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 PSPC1Q8WXF1 523 aaKnown RBP9.64□□□□□ -0.87
LRRC28-215ENST00000559774 CTAGE1Q96RT6 745 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 PLIN2Q99541 437 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 C7orf25Q9BPX7 421 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 NTPCRQ9BSD7 190 aaKnown RBP9.64□□□□□ -0.87
LRRC28-215ENST00000559774 NFKBIZQ9BYH8 718 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 GTPBP4Q9BZE4 634 aaKnown RBP9.64□□□□□ -0.87
LRRC28-215ENST00000559774 XPNPEP1Q9NQW7 623 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 TRMT13Q9NUP7 481 aaKnown RBP9.64□□□□□ -0.87
LRRC28-215ENST00000559774 LARSQ9P2J5 1176 aaKnown RBP9.64□□□□□ -0.87
LRRC28-215ENST00000559774 SEL1LQ9UBV2 794 aa9.64□□□□□ -0.87
LRRC28-215ENST00000559774 KIAA0100Q14667 2235 aaKnown RBP9.64□□□□□ -0.87
LRRC28-215ENST00000559774 TMEM150BA6NC51 233 aa9.63□□□□□ -0.87
LRRC28-215ENST00000559774 H0YCG3 227 aa9.63□□□□□ -0.87
LRRC28-215ENST00000559774 M0QZ92 97 aa9.63□□□□□ -0.87
LRRC28-215ENST00000559774 KIAA0355O15063 1070 aa9.63□□□□□ -0.87
LRRC28-215ENST00000559774 USO1O60763 962 aaKnown RBP9.63□□□□□ -0.87
LRRC28-215ENST00000559774 PQBP1O60828 265 aaKnown RBP9.63□□□□□ -0.87
LRRC28-215ENST00000559774 NR1I2O75469 434 aa9.63□□□□□ -0.87
LRRC28-215ENST00000559774 SSBP05455 408 aaKnown RBP eCLIP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms