RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 DDX39AO00148 427 aaKnown RBP12.61□□□□□ -0.39
HERC1-204ENST00000559715 IPO5O00410 1097 aaKnown RBP12.61□□□□□ -0.39
HERC1-204ENST00000559715 ZBTB43O43298 467 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 ZNF862O60290 1169 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 PPFIA3O75145 1194 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 RPS6KA5O75582 802 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 FGF18O76093 207 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 FGFR1P11362 822 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 CRYBB1P53674 252 aaPredicted RBP12.61□□□□□ -0.39
HERC1-204ENST00000559715 UBE3AQ05086 875 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 NTRK3Q16288 839 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 DUSP6Q16828 381 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 PFKFB3Q16875 520 aaPredicted RBP12.61□□□□□ -0.39
HERC1-204ENST00000559715 CSPP1Q1MSJ5 1256 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 KIZQ2M2Z5 673 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 ZNF484Q5JVG2 852 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 JAKMIP3Q5VZ66 844 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 SYCE2Q6PIF2 218 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 TRIM67Q6ZTA4 783 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 PLA2G4DQ86XP0 818 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 COLGALT1Q8NBJ5 622 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 PRSS33Q8NF86 280 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 KCNB2Q92953 911 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 TNPO1Q92973 898 aaKnown RBP12.61□□□□□ -0.39
HERC1-204ENST00000559715 CASD1Q96PB1 797 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 OSMRQ99650 979 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 ADAMTS10Q9H324 1103 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 ZNF302Q9NR11 478 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 PCDHB7Q9Y5E2 793 aa12.61□□□□□ -0.39
HERC1-204ENST00000559715 NID2Q14112 1375 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 ESYT2A0FGR8 921 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 TBKBP1A7MCY6 615 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 hCG_1984214I3L0E3 225 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 M0QZ92 97 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 VTNP04004 478 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 CPA1P15085 419 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 CIITAP33076 1130 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 RCAN1P53805 252 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 ZXDAP98168 799 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 BMP2KLQ5H9B9 411 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 PDXDC2PQ6P474 469 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 ZNF713Q8N859 430 aaPredicted RBP12.6□□□□□ -0.39
HERC1-204ENST00000559715 RASGRP4Q8TDF6 673 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 BBXQ8WY36 941 aaPredicted RBP12.6□□□□□ -0.39
HERC1-204ENST00000559715 ASIC4Q96FT7 647 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 CEP89Q96ST8 783 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 ELAC1Q9H777 363 aaKnown RBP12.6□□□□□ -0.39
HERC1-204ENST00000559715 TLE6Q9H808 572 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 TLR9Q9NR96 1032 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 C1orf112Q9NSG2 853 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 TMEM161AQ9NX61 479 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 GINS2Q9Y248 185 aa12.6□□□□□ -0.39
HERC1-204ENST00000559715 KLF18A0A0U1RQI7 1052 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 TMEM221A6NGB7 291 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 HIDE1A8MVS5 230 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 M0R296 226 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 BACH1O14867 736 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 GPR182O15218 404 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 ABCB7O75027 752 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 STBD1O95210 358 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 ATF7P17544 494 aaPredicted RBP12.59□□□□□ -0.39
HERC1-204ENST00000559715 PLCB3Q01970 1234 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 APOBRQ0VD83 1088 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 TCF15Q12870 199 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 ZNF746Q6NUN9 644 aaPredicted RBP12.59□□□□□ -0.39
HERC1-204ENST00000559715 ZNF598Q86UK7 904 aaKnown RBP12.59□□□□□ -0.39
HERC1-204ENST00000559715 PPP1R16BQ96T49 567 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 PHF7Q9BWX1 381 aaPredicted RBP12.59□□□□□ -0.39
HERC1-204ENST00000559715 CDH22Q9UJ99 828 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 LRFN2Q9ULH4 789 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 LZTS1Q9Y250 596 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 PCDHB12Q9Y5F1 795 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 PLXNA3P51805 1871 aa12.59□□□□□ -0.39
HERC1-204ENST00000559715 PTPRZ1P23471 2315 aaPredicted RBP12.59□□□□□ -0.39
HERC1-204ENST00000559715 GVINP1Q7Z2Y8 2422 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 GOLGA8AA7E2F4 631 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 GOLGA8BA8MQT2 603 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 PBX3P40426 434 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 CLCN3P51790 818 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 UGCGQ16739 394 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 CLLU1OSQ5K130 101 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 FAM160B1Q5W0V3 765 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 MIS18BP1Q6P0N0 1132 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 B3GNT9Q6UX72 402 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 SYNE3Q6ZMZ3 975 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 FBXL16Q8N461 479 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 PPP2R3CQ969Q6 453 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 MFSD14AQ96MC6 490 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 AGXT2Q9BYV1 514 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 GLT8D2Q9H1C3 349 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 TBC1D22BQ9NU19 505 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 PCDHA10Q9Y5I2 948 aa12.58□□□□□ -0.4
HERC1-204ENST00000559715 FAM186AA6NE01 2351 aa12.57□□□□□ -0.4
HERC1-204ENST00000559715 DENND3A2RUS2 1198 aa12.57□□□□□ -0.4
HERC1-204ENST00000559715 PRPF3O43395 683 aaKnown RBP12.57□□□□□ -0.4
HERC1-204ENST00000559715 IBSPP21815 317 aaPredicted RBP12.57□□□□□ -0.4
HERC1-204ENST00000559715 ZNF76P36508 570 aa12.57□□□□□ -0.4
HERC1-204ENST00000559715 NLRP11P59045 1033 aaKnown RBP12.57□□□□□ -0.4
HERC1-204ENST00000559715 DRP2Q13474 957 aa12.57□□□□□ -0.4
HERC1-204ENST00000559715 TARBP2Q15633 366 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms