RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 CHAMP1Q96JM3 812 aa10.31□□□□□ -0.76
SNRPA1-208ENST00000559686 CDHR5Q9HBB8 845 aa10.31□□□□□ -0.76
SNRPA1-208ENST00000559686 ATP6V0A4Q9HBG4 840 aa10.31□□□□□ -0.76
SNRPA1-208ENST00000559686 NGRNQ9NPE2 291 aaKnown RBP10.31□□□□□ -0.76
SNRPA1-208ENST00000559686 CYP26B1Q9NR63 512 aa10.31□□□□□ -0.76
SNRPA1-208ENST00000559686 DLL3Q9NYJ7 618 aa10.31□□□□□ -0.76
SNRPA1-208ENST00000559686 MAP3K20Q9NYL2 800 aaKnown RBP10.31□□□□□ -0.76
SNRPA1-208ENST00000559686 NOC2LQ9Y3T9 749 aaKnown RBP10.31□□□□□ -0.76
SNRPA1-208ENST00000559686 DENND4AQ7Z401 1863 aa10.31□□□□□ -0.76
SNRPA1-208ENST00000559686 NCOR2Q9Y618 2525 aa10.31□□□□□ -0.76
SNRPA1-208ENST00000559686 NT5C1B-RDH14C9J2C7 533 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 CCER2I3L3R5 266 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 ZNF213O14771 459 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 RPS6KA5O75582 802 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 EPCAMP16422 314 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 PLCB3Q01970 1234 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 KRT17Q04695 432 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 SMC1AQ14683 1233 aaKnown RBP10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 PLCB4Q15147 1175 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 ATAT1Q5SQI0 421 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 KIAA1841Q6NSI8 718 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 LRRC55Q6ZSA7 311 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 RNF169Q8NCN4 708 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 RSAD2Q8WXG1 361 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 SEPT1Q8WYJ6 367 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 ACSF2Q96CM8 615 aaPredicted RBP10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 ZNF558Q96NG5 402 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 SEMA4AQ9H3S1 761 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 SMARCAD1Q9H4L7 1026 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 ZSWIM5Q9P217 1185 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 LZTS1Q9Y250 596 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 SQORQ9Y6N5 450 aa10.3□□□□□ -0.76
SNRPA1-208ENST00000559686 EPG5Q9HCE0 2579 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 DCDC2BA2VCK2 349 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 C2orf71A6NGG8 1288 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 RRN3P2A6NIE6 340 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 STAM2O75886 525 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 CXCL14O95715 111 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 SP9P0CG40 484 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 PCP11498 1178 aaKnown RBP10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 METAP2P50579 478 aaKnown RBP eCLIP10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 SLC35G1Q2M3R5 365 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 CCDC178Q5BJE1 867 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 IFIT1BQ5T764 474 aaKnown RBP10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 XRRA1Q6P2D8 792 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 USP17L6PQ6QN14 398 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 NLRX1Q86UT6 975 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 MRPL43Q8N983 215 aaKnown RBP10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 SMARCC2Q8TAQ2 1214 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 EVI5LQ96CN4 794 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 MTMR8Q96EF0 704 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 UBAC1Q9BSL1 405 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 KCNK12Q9HB15 430 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 SPG21Q9NZD8 308 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 NCDNQ9UBB6 729 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 MAD2L2Q9UI95 211 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 DUSP12Q9UNI6 340 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 ST3GAL5Q9UNP4 418 aa10.29□□□□□ -0.76
SNRPA1-208ENST00000559686 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 KRBA1A5PL33 1030 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 C9IYK1 514 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 KCNA2P16389 499 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 ATXN1P54253 815 aaKnown RBP10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 ZC3H14Q6PJT7 736 aaKnown RBP10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 SLC24A5Q71RS6 500 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 ABI1Q8IZP0 508 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 SAMD3Q8N6K7 520 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 GIMAP8Q8ND71 665 aaPredicted RBP10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 ST13P5Q8NFI4 369 aaPredicted RBP10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 TMEM40Q8WWA1 233 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 CASD1Q96PB1 797 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 PCYT2Q99447 389 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 SENP7Q9BQF6 1050 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 TBC1D17Q9HA65 648 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 RGS18Q9NS28 235 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 C1orf112Q9NSG2 853 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 PCDHA2Q9Y5H9 948 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 C2orf16Q68DN1 1984 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 ZMYM6O95789 1325 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 FRMPD4Q14CM0 1322 aa10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 BAZ2BQ9UIF8 2168 aaKnown RBP10.28□□□□□ -0.76
SNRPA1-208ENST00000559686 EP300Q09472 2414 aaPredicted RBP10.27□□□□□ -0.76
SNRPA1-208ENST00000559686 MYBP10242 640 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 PPM1AP35813 382 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 KIZQ2M2Z5 673 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 PCNX4Q63HM2 1172 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 CCDC149Q6ZUS6 474 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 CABP7Q86V35 215 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 LRRC43Q8N309 656 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 CUL5Q93034 780 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 OSMRQ99650 979 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 TMEM117Q9H0C3 514 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 AZI2Q9H6S1 392 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 DZANK1Q9NVP4 752 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 TMEM161AQ9NX61 479 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 USTQ9Y2C2 406 aa10.27□□□□□ -0.77
SNRPA1-208ENST00000559686 PALM3A6NDB9 673 aaPredicted RBP10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 CYTH3O43739 400 aa10.26□□□□□ -0.77
SNRPA1-208ENST00000559686 LRRN2O75325 713 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms