RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 CXCL10P02778 98 aa22.65■■□□□ 1.22
TSPAN3-207ENST00000559494 RPLP2P05387 115 aaKnown RBP22.65■■□□□ 1.22
TSPAN3-207ENST00000559494 RARRES1P49788 294 aa22.65■■□□□ 1.22
TSPAN3-207ENST00000559494 DRP2Q13474 957 aa22.65■■□□□ 1.22
TSPAN3-207ENST00000559494 IER5Q5VY09 327 aa22.65■■□□□ 1.22
TSPAN3-207ENST00000559494 DHX33Q9H6R0 707 aaKnown RBP22.65■■□□□ 1.22
TSPAN3-207ENST00000559494 KIAA1024Q9UPX6 916 aa22.65■■□□□ 1.22
TSPAN3-207ENST00000559494 PPME1Q9Y570 386 aa22.65■■□□□ 1.22
TSPAN3-207ENST00000559494 SRPRBQ9Y5M8 271 aaKnown RBP22.65■■□□□ 1.22
TSPAN3-207ENST00000559494 FGBP02675 491 aa22.64■■□□□ 1.22
TSPAN3-207ENST00000559494 VTNP04004 478 aa22.64■■□□□ 1.22
TSPAN3-207ENST00000559494 TMOD1P28289 359 aa22.64■■□□□ 1.22
TSPAN3-207ENST00000559494 LONP1P36776 959 aaKnown RBP22.64■■□□□ 1.22
TSPAN3-207ENST00000559494 DNM1Q05193 864 aaKnown RBP22.64■■□□□ 1.22
TSPAN3-207ENST00000559494 AK8Q96MA6 479 aa22.64■■□□□ 1.22
TSPAN3-207ENST00000559494 CLIC6Q96NY7 704 aa22.64■■□□□ 1.22
TSPAN3-207ENST00000559494 CELF4Q9BZC1 486 aaKnown RBP22.64■■□□□ 1.22
TSPAN3-207ENST00000559494 CSRNP2Q9H175 543 aa22.64■■□□□ 1.22
TSPAN3-207ENST00000559494 CDHR5Q9HBB8 845 aa22.64■■□□□ 1.22
TSPAN3-207ENST00000559494 DBR1Q9UK59 544 aaKnown RBP22.64■■□□□ 1.22
TSPAN3-207ENST00000559494 ANP32AP39687 249 aaKnown RBP22.63■■□□□ 1.21
TSPAN3-207ENST00000559494 RFC5P40937 340 aa22.63■■□□□ 1.21
TSPAN3-207ENST00000559494 STK38Q15208 465 aa22.63■■□□□ 1.21
TSPAN3-207ENST00000559494 TCTN1Q2MV58 587 aa22.63■■□□□ 1.21
TSPAN3-207ENST00000559494 HYIQ5T013 277 aa22.63■■□□□ 1.21
TSPAN3-207ENST00000559494 PNMA5Q96PV4 448 aa22.63■■□□□ 1.21
TSPAN3-207ENST00000559494 DDX19AQ9NUU7 478 aaKnown RBP22.63■■□□□ 1.21
TSPAN3-207ENST00000559494 TRPV2Q9Y5S1 764 aa22.63■■□□□ 1.21
TSPAN3-207ENST00000559494 LOXHD1Q8IVV2 1947 aa22.63■■□□□ 1.21
TSPAN3-207ENST00000559494 YEATS4O95619 227 aa22.62■■□□□ 1.21
TSPAN3-207ENST00000559494 PFKMP08237 780 aa22.62■■□□□ 1.21
TSPAN3-207ENST00000559494 GRB10Q13322 594 aa22.62■■□□□ 1.21
TSPAN3-207ENST00000559494 SPECC1Q5M775 1068 aa22.62■■□□□ 1.21
TSPAN3-207ENST00000559494 ATL3Q6DD88 541 aa22.62■■□□□ 1.21
TSPAN3-207ENST00000559494 CABP7Q86V35 215 aa22.62■■□□□ 1.21
TSPAN3-207ENST00000559494 TDHQ8IZJ6 230 aa22.62■■□□□ 1.21
TSPAN3-207ENST00000559494 CHAMP1Q96JM3 812 aa22.62■■□□□ 1.21
TSPAN3-207ENST00000559494 PPP1R16BQ96T49 567 aa22.62■■□□□ 1.21
TSPAN3-207ENST00000559494 JPH2Q9BR39 696 aaPredicted RBP22.62■■□□□ 1.21
TSPAN3-207ENST00000559494 BMP2KQ9NSY1 1161 aaPredicted RBP22.62■■□□□ 1.21
TSPAN3-207ENST00000559494 AKT3Q9Y243 479 aa22.62■■□□□ 1.21
TSPAN3-207ENST00000559494 KDM3AQ9Y4C1 1321 aa22.62■■□□□ 1.21
TSPAN3-207ENST00000559494 SPTLC2O15270 562 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 GPR32O75388 356 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 DNM2P50570 870 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 POLGP54098 1239 aaPredicted RBP22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 LPIN1Q14693 890 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 ZRSR1Q15695 479 aaKnown RBP22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 FBXO47Q5MNV8 452 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 PSRC1Q6PGN9 363 aaPredicted RBP22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 USP49Q70CQ1 688 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 OTOP2Q7RTS6 562 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 KCNK18Q7Z418 384 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 EXOC8Q8IYI6 725 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 SLC7A3Q8WY07 619 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 TMEM143Q96AN5 459 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 MAP7D2Q96T17 732 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 PLIN2Q99541 437 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 XPNPEP1Q9NQW7 623 aa22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 SUCLA2Q9P2R7 463 aaPredicted RBP22.61■■□□□ 1.21
TSPAN3-207ENST00000559494 E9PMD0 336 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 M0QZ92 97 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 GHRP10912 638 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 UBA7P41226 1012 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 NLRP11P59045 1033 aaKnown RBP22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 EMC2Q15006 297 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 KIZQ2M2Z5 673 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 PLEKHG4Q58EX7 1191 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 KRI1Q8N9T8 703 aaKnown RBP22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 DBF4BQ8NFT6 615 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 HERVK_113Q902F9 699 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 EPSTI1Q96J88 318 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 ZNF668Q96K58 619 aaPredicted RBP22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 ADAMTS10Q9H324 1103 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 DNM3Q9UQ16 869 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 GINS2Q9Y248 185 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 RBM19Q9Y4C8 960 aaKnown RBP22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 SIP14410 1827 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 ARID2Q68CP9 1835 aa22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 LAMA2P24043 3122 aaKnown RBP22.6■■□□□ 1.21
TSPAN3-207ENST00000559494 PPP6R2O75170 966 aa22.59■■□□□ 1.21
TSPAN3-207ENST00000559494 DGAT1O75907 488 aa22.59■■□□□ 1.21
TSPAN3-207ENST00000559494 NUCB2P80303 420 aa22.59■■□□□ 1.21
TSPAN3-207ENST00000559494 RASIP1Q5U651 963 aa22.59■■□□□ 1.21
TSPAN3-207ENST00000559494 CNKSR3Q6P9H4 555 aa22.59■■□□□ 1.21
TSPAN3-207ENST00000559494 CCDC43Q96MW1 224 aaKnown RBP22.59■■□□□ 1.21
TSPAN3-207ENST00000559494 CCSER1Q9C0I3 900 aa22.59■■□□□ 1.21
TSPAN3-207ENST00000559494 AGO3Q9H9G7 860 aaKnown RBP22.59■■□□□ 1.21
TSPAN3-207ENST00000559494 CXXC1Q9P0U4 656 aaPredicted RBP22.59■■□□□ 1.21
TSPAN3-207ENST00000559494 RCOR1Q9UKL0 485 aa22.59■■□□□ 1.21
TSPAN3-207ENST00000559494 CFAP45Q9UL16 551 aa22.59■■□□□ 1.21
TSPAN3-207ENST00000559494 TCHHQ07283 1943 aa22.59■■□□□ 1.21
TSPAN3-207ENST00000559494 A0A1W2PPC1 479 aa22.58■■□□□ 1.21
TSPAN3-207ENST00000559494 ARHGEF35A5YM69 484 aa22.58■■□□□ 1.21
TSPAN3-207ENST00000559494 SLC26A4O43511 780 aa22.58■■□□□ 1.21
TSPAN3-207ENST00000559494 EYA4O95677 639 aa22.58■■□□□ 1.21
TSPAN3-207ENST00000559494 GPC3P51654 580 aa22.58■■□□□ 1.21
TSPAN3-207ENST00000559494 CRYBB1P53674 252 aaPredicted RBP22.58■■□□□ 1.21
TSPAN3-207ENST00000559494 TMEM119Q4V9L6 283 aa22.58■■□□□ 1.21
TSPAN3-207ENST00000559494 PADI6Q6TGC4 694 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms