RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 STK24Q9Y6E0 443 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 KDM3AQ9Y4C1 1321 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 LTBP2Q14767 1821 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 CDH23Q9H251 3354 aa4.9□□□□□ -1.63
SNX1-205ENST00000559339 FAM205CA6NFA0 338 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 ZBTB42B2RXF5 422 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 EML1O00423 815 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 LAD1O00515 517 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 ENPP3O14638 875 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 GTPBP6O43824 516 aaPredicted RBP4.89□□□□□ -1.63
SNX1-205ENST00000559339 GAS2O43903 313 aaKnown RBP4.89□□□□□ -1.63
SNX1-205ENST00000559339 ZNF862O60290 1169 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 UPP2O95045 317 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 C22orf31O95567 290 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 VTNP04004 478 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 HSP90AA1P07900 732 aaKnown RBP4.89□□□□□ -1.63
SNX1-205ENST00000559339 OR52Z1P0C646 297 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 PYGBP11216 843 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 MYOGP15173 224 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 CD44P16070 742 aaKnown RBP4.89□□□□□ -1.63
SNX1-205ENST00000559339 ZSCAN20P17040 1043 aaPredicted RBP4.89□□□□□ -1.63
SNX1-205ENST00000559339 IGFBP4P22692 258 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 SFPQP23246 707 aaKnown RBP eCLIP4.89□□□□□ -1.63
SNX1-205ENST00000559339 EIF4BP23588 611 aaKnown RBP4.89□□□□□ -1.63
SNX1-205ENST00000559339 U2AF2P26368 475 aaKnown RBP eCLIP4.89□□□□□ -1.63
SNX1-205ENST00000559339 GJB2P29033 226 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 CD52P31358 61 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 RFC5P40937 340 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 TECP42680 631 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 CLCN3P51790 818 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 NLRP11P59045 1033 aaKnown RBP4.89□□□□□ -1.63
SNX1-205ENST00000559339 DEFB103AP81534 67 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 CYP4A11Q02928 519 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 NCBP1Q09161 790 aaKnown RBP4.89□□□□□ -1.63
SNX1-205ENST00000559339 MGAT3Q09327 533 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 LPIN1Q14693 890 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 GRIN2CQ14957 1233 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 ZNF174Q15697 407 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 UGCGQ16739 394 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 TTC38Q5R3I4 469 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 B3GNT9Q6UX72 402 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.89□□□□□ -1.63
SNX1-205ENST00000559339 C4orf19Q8IY42 314 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 TCP11Q8WWU5 503 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 ARNTL2Q8WYA1 636 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 GUCD1Q96NT3 240 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 TGS1Q96RS0 853 aaKnown RBP4.89□□□□□ -1.63
SNX1-205ENST00000559339 OSMRQ99650 979 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 EIF2AK1Q9BQI3 630 aaKnown RBP4.89□□□□□ -1.63
SNX1-205ENST00000559339 GCOM2Q9BZD3 368 aaPredicted RBP4.89□□□□□ -1.63
SNX1-205ENST00000559339 PRDM12Q9H4Q4 367 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 CYP26B1Q9NR63 512 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 C1orf112Q9NSG2 853 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 DACT1Q9NYF0 836 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 VAV3Q9UKW4 847 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 LRFN2Q9ULH4 789 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 PADI3Q9ULW8 664 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 YBX2Q9Y2T7 364 aaKnown RBP4.89□□□□□ -1.63
SNX1-205ENST00000559339 RWDD3Q9Y3V2 267 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 MYH7BA7E2Y1 1941 aa4.89□□□□□ -1.63
SNX1-205ENST00000559339 LINC01553A4QN01 128 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 POTEMA6NI47 508 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 ASAP2O43150 1006 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 GPR32O75388 356 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 MAFO75444 373 aaPredicted RBP4.88□□□□□ -1.63
SNX1-205ENST00000559339 DGAT1O75907 488 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 SLITRK3O94933 977 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 LYPLA2O95372 231 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 CD2BP2O95400 341 aaKnown RBP4.88□□□□□ -1.63
SNX1-205ENST00000559339 XRCC6P12956 609 aaKnown RBP eCLIP4.88□□□□□ -1.63
SNX1-205ENST00000559339 PDIA4P13667 645 aaKnown RBP4.88□□□□□ -1.63
SNX1-205ENST00000559339 DARSP14868 501 aaKnown RBP4.88□□□□□ -1.63
SNX1-205ENST00000559339 MUTP22033 750 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 GPC3P51654 580 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 SPIRE1Q08AE8 756 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 TFDP1Q14186 410 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 CTTNQ14247 550 aaKnown RBP4.88□□□□□ -1.63
SNX1-205ENST00000559339 PDIA5Q14554 519 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 MXD4Q14582 209 aaPredicted RBP4.88□□□□□ -1.63
SNX1-205ENST00000559339 PCBP1Q15365 356 aaKnown RBP eCLIP4.88□□□□□ -1.63
SNX1-205ENST00000559339 TARBP2Q15633 366 aaKnown RBP4.88□□□□□ -1.63
SNX1-205ENST00000559339 XKR9Q5GH70 373 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 KRT79Q5XKE5 535 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 DTHD1Q6ZMT9 781 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 SLC24A5Q71RS6 500 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 ANO5Q75V66 913 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 TMCO2Q7Z6W1 182 aaPredicted RBP4.88□□□□□ -1.63
SNX1-205ENST00000559339 ZNF410Q86VK4 478 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 RHPN2Q8IUC4 686 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 NPAS4Q8IUM7 802 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 ABI1Q8IZP0 508 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 LRRC71Q8N4P6 559 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 SLC17A8Q8NDX2 589 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 MAFAQ8NHW3 353 aaPredicted RBP4.88□□□□□ -1.63
SNX1-205ENST00000559339 PSPC1Q8WXF1 523 aaKnown RBP4.88□□□□□ -1.63
SNX1-205ENST00000559339 MYLIPQ8WY64 445 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 INTS4Q96HW7 963 aaKnown RBP4.88□□□□□ -1.63
SNX1-205ENST00000559339 DYDC2Q96IM9 177 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 NLRP4Q96MN2 994 aa4.88□□□□□ -1.63
SNX1-205ENST00000559339 SAMD11Q96NU1 681 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms