RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 SENP6Q9GZR1 1112 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 TNMDQ9H2S6 317 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 TRPC6Q9Y210 931 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 PCDHA2Q9Y5H9 948 aa16.5■□□□□ 0.23
SNRPA1-207ENST00000559309 SIP14410 1827 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 SMIM35A0A1B0GVV1 85 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 FRMD3A2A2Y4 597 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 C17orf102A2RUQ5 167 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 MAGEB2O15479 319 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 NR1I2O75469 434 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 STAT6P42226 847 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 MAPK7Q13164 816 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 MCM6Q14566 821 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 MTERF2Q49AM1 385 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 XKR9Q5GH70 373 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 KRBA2Q6ZNG9 492 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 CKAP2LQ8IYA6 745 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 EXOC8Q8IYI6 725 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 DAW1Q8N136 415 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 GPT2Q8TD30 523 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 PPP1R13LQ8WUF5 828 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 EVPLQ92817 2033 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 KCNN1Q92952 543 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 DNAJC19Q96DA6 116 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 SH2D3AQ9BRG2 576 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 RUSC1Q9BVN2 902 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 SERTAD1Q9UHV2 236 aa16.49■□□□□ 0.23
SNRPA1-207ENST00000559309 SZT2Q5T011 3432 aa16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 GOLGA6L4A6NEF3 574 aa16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 TREHO43280 583 aa16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 GAS2O43903 313 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 B4GALT4O60513 344 aa16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 MYCNP04198 464 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 GNAT1P11488 350 aa16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 KLRC1P26715 233 aa16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 ZNF131P52739 623 aa16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 ZNF200P98182 395 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 LRRC26Q2I0M4 334 aa16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 PADI6Q6TGC4 694 aa16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 DHX38Q92620 1227 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 WNT8BQ93098 351 aa16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 DHX58Q96C10 678 aa16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 TIPINQ9BVW5 301 aa16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 TUBE1Q9UJT0 475 aa16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 COLQQ9Y215 455 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-207ENST00000559309 MROH7Q68CQ1 1323 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 MYMKA6NI61 221 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 ARL2P36404 184 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 RTP1P59025 263 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 EHHADHQ08426 723 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 PTK7Q13308 1070 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 EMC2Q15006 297 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 TRAF7Q6Q0C0 670 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 RUFY4Q6ZNE9 571 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 KIAA0319LQ8IZA0 1049 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 SPATA20Q8TB22 786 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 ZBTB10Q96DT7 871 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 C7orf25Q9BPX7 421 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 TRIM9Q9C026 710 aa16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 TRMT13Q9NUP7 481 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-207ENST00000559309 ARHGEF35A5YM69 484 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 GOLGA6L22H0YM25 854 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 MYL1P05976 194 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 TBC1D8BQ0IIM8 1120 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 FAAP100Q0VG06 881 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 DRP2Q13474 957 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 GIT2Q14161 759 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 ZRSR1Q15695 479 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 PTGISQ16647 500 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 TAF2Q6P1X5 1199 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 SV2BQ7L1I2 683 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 MCPH1Q8NEM0 835 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 PAGE5Q96GU1 130 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 JPH2Q9BR39 696 aaPredicted RBP16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 TRPV6Q9H1D0 765 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 ATP6V0A4Q9HBG4 840 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 TBX21Q9UL17 535 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 ODF2LQ9ULJ1 636 aa16.46■□□□□ 0.23
SNRPA1-207ENST00000559309 TANC1Q9C0D5 1861 aa16.46■□□□□ 0.22
SNRPA1-207ENST00000559309 H0YGN5 161 aa16.45■□□□□ 0.22
SNRPA1-207ENST00000559309 CAND2O75155 1236 aa16.45■□□□□ 0.22
SNRPA1-207ENST00000559309 RPLP2P05387 115 aaKnown RBP16.45■□□□□ 0.22
SNRPA1-207ENST00000559309 POU5F1BQ06416 359 aa16.45■□□□□ 0.22
SNRPA1-207ENST00000559309 TRIM60Q495X7 471 aa16.45■□□□□ 0.22
SNRPA1-207ENST00000559309 IER5Q5VY09 327 aa16.45■□□□□ 0.22
SNRPA1-207ENST00000559309 GPBP1Q86WP2 473 aa16.45■□□□□ 0.22
SNRPA1-207ENST00000559309 SLC7A3Q8WY07 619 aa16.45■□□□□ 0.22
SNRPA1-207ENST00000559309 FIZ1Q96SL8 496 aa16.45■□□□□ 0.22
SNRPA1-207ENST00000559309 REEP2Q9BRK0 252 aa16.45■□□□□ 0.22
SNRPA1-207ENST00000559309 NTPCRQ9BSD7 190 aaKnown RBP16.45■□□□□ 0.22
SNRPA1-207ENST00000559309 DACT1Q9NYF0 836 aa16.45■□□□□ 0.22
SNRPA1-207ENST00000559309 KLRC4O43908 158 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 USO1O60763 962 aaKnown RBP16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 CYP2C9P11712 490 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 POLGP54098 1239 aaPredicted RBP16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 IGBP1P78318 339 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 TLE2Q04725 743 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 MGAT3Q09327 533 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 DPYDQ12882 1025 aa16.44■□□□□ 0.22
SNRPA1-207ENST00000559309 FAM26DQ5JW98 314 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms