RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 SNX29Q8TEQ0 813 aa12.79□□□□□ -0.36
SNX1-204ENST00000559061 PPP1R16BQ96T49 567 aa12.79□□□□□ -0.36
SNX1-204ENST00000559061 CSRNP2Q9H175 543 aa12.79□□□□□ -0.36
SNX1-204ENST00000559061 ADAMTS10Q9H324 1103 aa12.79□□□□□ -0.36
SNX1-204ENST00000559061 AGO3Q9H9G7 860 aaKnown RBP12.79□□□□□ -0.36
SNX1-204ENST00000559061 NRBP2Q9NSY0 501 aa12.79□□□□□ -0.36
SNX1-204ENST00000559061 BMP2KQ9NSY1 1161 aaPredicted RBP12.79□□□□□ -0.36
SNX1-204ENST00000559061 CXXC1Q9P0U4 656 aaPredicted RBP12.79□□□□□ -0.36
SNX1-204ENST00000559061 SRPRBQ9Y5M8 271 aaKnown RBP12.79□□□□□ -0.36
SNX1-204ENST00000559061 TRIOBPQ9H2D6 2365 aa12.79□□□□□ -0.36
SNX1-204ENST00000559061 RSPH10B2B2RC85 870 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 BMP15O95972 392 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 RSPH10BP0C881 870 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 CCT6AP40227 531 aaKnown RBP12.78□□□□□ -0.36
SNX1-204ENST00000559061 EMC2Q15006 297 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 FBXO47Q5MNV8 452 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 FAM109BQ6ICB4 259 aaPredicted RBP12.78□□□□□ -0.36
SNX1-204ENST00000559061 ZNF365Q70YC5 407 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 DEFB128Q7Z7B8 93 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 TMEM199Q8N511 208 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 LINC01599Q8WXQ3 324 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 EPSTI1Q96J88 318 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 ZNF668Q96K58 619 aaPredicted RBP12.78□□□□□ -0.36
SNX1-204ENST00000559061 CEP170P1Q96L14 293 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 LBHD1Q9BQE6 289 aaPredicted RBP12.78□□□□□ -0.36
SNX1-204ENST00000559061 UBE2OQ9C0C9 1292 aaKnown RBP12.78□□□□□ -0.36
SNX1-204ENST00000559061 ANKEF1Q9NU02 776 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 BLOC1S4Q9NUP1 217 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 DDX19AQ9NUU7 478 aaKnown RBP12.78□□□□□ -0.36
SNX1-204ENST00000559061 DAXXQ9UER7 740 aaPredicted RBP12.78□□□□□ -0.36
SNX1-204ENST00000559061 DBR1Q9UK59 544 aaKnown RBP12.78□□□□□ -0.36
SNX1-204ENST00000559061 CEP131Q9UPN4 1083 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 KIAA1024Q9UPX6 916 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 KDM3AQ9Y4C1 1321 aa12.78□□□□□ -0.36
SNX1-204ENST00000559061 E9PMD0 336 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 SOX1O00570 391 aaPredicted RBP12.77□□□□□ -0.37
SNX1-204ENST00000559061 MAGEB2O15479 319 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 YEATS4O95619 227 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 PDIA4P13667 645 aaKnown RBP12.77□□□□□ -0.37
SNX1-204ENST00000559061 RFC2P35250 354 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 GPC3P51654 580 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 TBC1D8BQ0IIM8 1120 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 PPIGQ13427 754 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNX1-204ENST00000559061 NAALADL2Q58DX5 795 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 PLEKHG4Q58EX7 1191 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 XKR9Q5GH70 373 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 HAUS3Q68CZ6 603 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 KSR1Q8IVT5 923 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 CCDC155Q8N6L0 562 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 METTL13Q8N6R0 699 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 RETREG2Q8NC44 543 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 ASAP3Q8TDY4 903 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 TMEM143Q96AN5 459 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 PLIN2Q99541 437 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 GPRC5CQ9NQ84 441 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 RBM19Q9Y4C8 960 aaKnown RBP12.77□□□□□ -0.37
SNX1-204ENST00000559061 TRPV2Q9Y5S1 764 aa12.77□□□□□ -0.37
SNX1-204ENST00000559061 SZT2Q5T011 3432 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 GHRP10912 638 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 XRCC6P12956 609 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNX1-204ENST00000559061 MUTP22033 750 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 LONP1P36776 959 aaKnown RBP12.76□□□□□ -0.37
SNX1-204ENST00000559061 KARSQ15046 597 aaKnown RBP12.76□□□□□ -0.37
SNX1-204ENST00000559061 KIZQ2M2Z5 673 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 SHC4Q6S5L8 630 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 CABP7Q86V35 215 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 TDHQ8IZJ6 230 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 DAW1Q8N136 415 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 ERMNQ8TAM6 284 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 BSNDQ8WZ55 320 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 HERVK_113Q902F9 699 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 SYMPKQ92797 1274 aaKnown RBP12.76□□□□□ -0.37
SNX1-204ENST00000559061 AK8Q96MA6 479 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 OSMRQ99650 979 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 RUSC1Q9BVN2 902 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 CELF4Q9BZC1 486 aaKnown RBP12.76□□□□□ -0.37
SNX1-204ENST00000559061 CCSER1Q9C0I3 900 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 TMX1Q9H3N1 280 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 SUGCTQ9HAC7 445 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 RCOR1Q9UKL0 485 aa12.76□□□□□ -0.37
SNX1-204ENST00000559061 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.75□□□□□ -0.37
SNX1-204ENST00000559061 SPTLC2O15270 562 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 MGEA5O60502 916 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 USO1O60763 962 aaKnown RBP12.75□□□□□ -0.37
SNX1-204ENST00000559061 DKC1O60832 514 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNX1-204ENST00000559061 PPP6R2O75170 966 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 EYA4O95677 639 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 PLCG1P19174 1290 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 ARL2P36404 184 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 RFC5P40937 340 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 SLC12A3P55017 1021 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 MAPK7Q13164 816 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 KRT79Q5XKE5 535 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 OTOP2Q7RTS6 562 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 FAM228AQ86W67 206 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 NME8Q8N427 588 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 KRI1Q8N9T8 703 aaKnown RBP12.75□□□□□ -0.37
SNX1-204ENST00000559061 DBF4BQ8NFT6 615 aa12.75□□□□□ -0.37
SNX1-204ENST00000559061 TNPO1Q92973 898 aaKnown RBP12.75□□□□□ -0.37
SNX1-204ENST00000559061 ZNF396Q96N95 335 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms