RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 SUGCTQ9HAC7 445 aa11.25□□□□□ -0.61
SPG11-212ENST00000558790 NCOR2Q9Y618 2525 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 A0A1B0GTH6 734 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 OPLAHO14841 1288 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 PARNO95453 639 aaKnown RBP11.24□□□□□ -0.61
SPG11-212ENST00000558790 CASTP20810 708 aaKnown RBP11.24□□□□□ -0.61
SPG11-212ENST00000558790 SERPINB4P48594 390 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 ERVK-21P61565 698 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 STXBP2Q15833 593 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 KIAA0753Q2KHM9 967 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 FAM117BQ6P1L5 589 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 DGKHQ86XP1 1220 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 C7orf31Q8N865 590 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 PPTC7Q8NI37 304 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.24□□□□□ -0.61
SPG11-212ENST00000558790 TGS1Q96RS0 853 aaKnown RBP11.24□□□□□ -0.61
SPG11-212ENST00000558790 IWS1Q96ST2 819 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 RAD9AQ99638 391 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 KATNAL1Q9BW62 490 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 RNF41Q9H4P4 317 aaPredicted RBP11.24□□□□□ -0.61
SPG11-212ENST00000558790 RUBCNLQ9H714 662 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 UBE2ZQ9H832 354 aaPredicted RBP11.24□□□□□ -0.61
SPG11-212ENST00000558790 PXMP2Q9NR77 195 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 LMCD1Q9NZU5 365 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 DDX41Q9UJV9 622 aaKnown RBP11.24□□□□□ -0.61
SPG11-212ENST00000558790 DYRK1BQ9Y463 629 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 MRVI1Q9Y6F6 885 aa11.24□□□□□ -0.61
SPG11-212ENST00000558790 TPRP12270 2363 aaKnown RBP11.23□□□□□ -0.61
SPG11-212ENST00000558790 ABHD14A-ACY1A0A1B0GW23 586 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 SLC35F4A4IF30 521 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 HAS3O00219 553 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 DCXO43602 365 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 SORBS3O60504 671 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 ALADP13716 330 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 ZNF200P98182 395 aaPredicted RBP11.23□□□□□ -0.61
SPG11-212ENST00000558790 TCF15Q12870 199 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 ASPRV1Q53RT3 343 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 ZNF618Q5T7W0 954 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 ARHGEF16Q5VV41 709 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 RIPOR1Q6ZS17 1223 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 MCF2L2Q86YR7 1114 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 ENAHQ8N8S7 591 aaPredicted RBP11.23□□□□□ -0.61
SPG11-212ENST00000558790 MAF1Q9H063 256 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 KAT14Q9H8E8 782 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 ZDHHC3Q9NYG2 299 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 GVINP1Q7Z2Y8 2422 aa11.23□□□□□ -0.61
SPG11-212ENST00000558790 B4E1Z4 1266 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 DHX16O60231 1041 aaKnown RBP11.22□□□□□ -0.61
SPG11-212ENST00000558790 EFCAB14O75071 495 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 EIF3JO75822 258 aaKnown RBP11.22□□□□□ -0.61
SPG11-212ENST00000558790 CFBP00751 764 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 HOXD8P13378 290 aaPredicted RBP11.22□□□□□ -0.61
SPG11-212ENST00000558790 HSD17B4P51659 736 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 TTC3P53804 2025 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 RRP1P56182 461 aaKnown RBP11.22□□□□□ -0.61
SPG11-212ENST00000558790 IKBKEQ14164 716 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 ARSJQ5FYB0 599 aaPredicted RBP11.22□□□□□ -0.61
SPG11-212ENST00000558790 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.22□□□□□ -0.61
SPG11-212ENST00000558790 IQCA1Q86XH1 822 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 FBXO11Q86XK2 927 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 TICAM2Q86XR7 235 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 IL31RAQ8NI17 732 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 RILPL2Q969X0 211 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 CRBNQ96SW2 442 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 C17orf80Q9BSJ5 609 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 LNPKQ9C0E8 428 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 JMJD4Q9H9V9 463 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 ALG13Q9NP73 1137 aaKnown RBP11.22□□□□□ -0.61
SPG11-212ENST00000558790 ANO2Q9NQ90 1003 aa11.22□□□□□ -0.61
SPG11-212ENST00000558790 MRPL11Q9Y3B7 192 aaKnown RBP11.22□□□□□ -0.61
SPG11-212ENST00000558790 EMSYQ7Z589 1322 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 ZNF213O14771 459 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 PPP1R11O60927 126 aaPredicted RBP11.21□□□□□ -0.61
SPG11-212ENST00000558790 ABL1P00519 1130 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 PARP1P09874 1014 aaKnown RBP11.21□□□□□ -0.61
SPG11-212ENST00000558790 UBA1P22314 1058 aaKnown RBP11.21□□□□□ -0.61
SPG11-212ENST00000558790 KCNA5P22460 613 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 MFAP1P55081 439 aaKnown RBP11.21□□□□□ -0.61
SPG11-212ENST00000558790 GHRHRQ02643 423 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 ZNF211Q13398 564 aaPredicted RBP11.21□□□□□ -0.61
SPG11-212ENST00000558790 HDAC1Q13547 482 aaPredicted RBP11.21□□□□□ -0.61
SPG11-212ENST00000558790 MTMR3Q13615 1198 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 LAMC2Q13753 1193 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 HSDL1Q3SXM5 330 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 COX20Q5RI15 118 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 ZNF787Q6DD87 383 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 DHX37Q8IY37 1157 aaKnown RBP11.21□□□□□ -0.61
SPG11-212ENST00000558790 MYOCDQ8IZQ8 938 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 COL26A1Q96A83 441 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 PDCD2LQ9BRP1 358 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 VAT1LQ9HCJ6 419 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 CUEDC1Q9NWM3 386 aaPredicted RBP11.21□□□□□ -0.61
SPG11-212ENST00000558790 LRFN2Q9ULH4 789 aa11.21□□□□□ -0.61
SPG11-212ENST00000558790 PLXNA4Q9HCM2 1894 aa11.21□□□□□ -0.62
SPG11-212ENST00000558790 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.2□□□□□ -0.62
SPG11-212ENST00000558790 GGPS1O95749 300 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 F11P03951 625 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 MYCLP12524 364 aaPredicted RBP11.2□□□□□ -0.62
SPG11-212ENST00000558790 SDSP20132 328 aa11.2□□□□□ -0.62
SPG11-212ENST00000558790 HOXA13P31271 388 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms