RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 SQORQ9Y6N5 450 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 FREM2Q5SZK8 3169 aa13.72□□□□□ -0.21
SMAD3-206ENST00000558739 SDK1Q7Z5N4 2213 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-206ENST00000558739 NT5C1B-RDH14C9J2C7 533 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 M0QZ92 97 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 KINO60870 393 aaKnown RBP13.71□□□□□ -0.21
SMAD3-206ENST00000558739 KCNA2P16389 499 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 KRT76Q01546 638 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 MFSD6Q6ZSS7 791 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 SLC24A5Q71RS6 500 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 OTOP3Q7RTS5 596 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 SLC39A11Q8N1S5 342 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 ENAHQ8N8S7 591 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-206ENST00000558739 GPR152Q8TDT2 470 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 GLG1Q92896 1179 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 ACSF2Q96CM8 615 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-206ENST00000558739 MTMR8Q96EF0 704 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 KAT14Q9H8E8 782 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 WNT16Q9UBV4 365 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 ST3GAL5Q9UNP4 418 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 SMG5Q9UPR3 1016 aaKnown RBP13.71□□□□□ -0.21
SMAD3-206ENST00000558739 NAV2Q8IVL1 2488 aa13.71□□□□□ -0.21
SMAD3-206ENST00000558739 KDM3AQ9Y4C1 1321 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 DOCK6Q96HP0 2047 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 ZBTB5O15062 677 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 PLCB4Q15147 1175 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 DGKHQ86XP1 1220 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 SLC22A17Q8WUG5 538 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 COL26A1Q96A83 441 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 RTKNQ9BST9 563 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 ATP6V0A4Q9HBG4 840 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 DZANK1Q9NVP4 752 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 SPG21Q9NZD8 308 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 DDX19BQ9UMR2 479 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 USP18Q9UMW8 372 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 SIT1Q9Y3P8 196 aa13.7□□□□□ -0.22
SMAD3-206ENST00000558739 RPS6KA5O75582 802 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 PPM1AP35813 382 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 METAP2P50579 478 aaKnown RBP eCLIP13.69□□□□□ -0.22
SMAD3-206ENST00000558739 LMNB2Q03252 620 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 KRT17Q04695 432 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 CLLU1OSQ5K130 101 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 GPR149Q86SP6 731 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 CABP7Q86V35 215 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 FAM228AQ86W67 206 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 LRRC43Q8N309 656 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 BCL7CQ8WUZ0 217 aaPredicted RBP13.69□□□□□ -0.22
SMAD3-206ENST00000558739 PIGSQ96S52 555 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 SENP7Q9BQF6 1050 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 TMEM117Q9H0C3 514 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 ZBP1Q9H171 429 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 ARHGEF3Q9NR81 526 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 TMEM161AQ9NX61 479 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 MAP3K20Q9NYL2 800 aaKnown RBP13.69□□□□□ -0.22
SMAD3-206ENST00000558739 PCDHA2Q9Y5H9 948 aa13.69□□□□□ -0.22
SMAD3-206ENST00000558739 F5P12259 2224 aa13.68□□□□□ -0.22
SMAD3-206ENST00000558739 MYH15Q9Y2K3 1946 aa13.68□□□□□ -0.22
SMAD3-206ENST00000558739 CXCL14O95715 111 aa13.68□□□□□ -0.22
SMAD3-206ENST00000558739 KCNA4P22459 653 aa13.68□□□□□ -0.22
SMAD3-206ENST00000558739 LETM2Q2VYF4 491 aa13.68□□□□□ -0.22
SMAD3-206ENST00000558739 VPS52Q8N1B4 723 aa13.68□□□□□ -0.22
SMAD3-206ENST00000558739 SLC44A3Q8N4M1 653 aa13.68□□□□□ -0.22
SMAD3-206ENST00000558739 PJA1Q8NG27 643 aa13.68□□□□□ -0.22
SMAD3-206ENST00000558739 ESR2Q92731 530 aa13.68□□□□□ -0.22
SMAD3-206ENST00000558739 VN1R3Q9BXE9 311 aa13.68□□□□□ -0.22
SMAD3-206ENST00000558739 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
SMAD3-206ENST00000558739 C1orf112Q9NSG2 853 aa13.68□□□□□ -0.22
SMAD3-206ENST00000558739 IGSF9Q9P2J2 1179 aa13.68□□□□□ -0.22
SMAD3-206ENST00000558739 MAD2L2Q9UI95 211 aa13.68□□□□□ -0.22
SMAD3-206ENST00000558739 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.68□□□□□ -0.22
SMAD3-206ENST00000558739 CELSR3Q9NYQ7 3312 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 ZMYM6O95789 1325 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 TTC41PQ6P2S7 1318 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 PRR5-ARHGAP8B1AHC4 643 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 B4E1Z4 1266 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 KLRF2D3W0D1 207 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 SDHBP21912 280 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 FAM189BP81408 668 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 ARHGAP8P85298 464 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 DSC3Q14574 896 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 WTAPQ15007 396 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 RNF169Q8NCN4 708 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 SEPT1Q8WYJ6 367 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 MYADMQ96S97 322 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 ZSCAN10Q96SZ4 725 aaPredicted RBP13.67□□□□□ -0.22
SMAD3-206ENST00000558739 SMARCAD1Q9H4L7 1026 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 SFXN1Q9H9B4 322 aa13.67□□□□□ -0.22
SMAD3-206ENST00000558739 SMIM35A0A1B0GVV1 85 aa13.66□□□□□ -0.22
SMAD3-206ENST00000558739 RRN3P2A6NIE6 340 aa13.66□□□□□ -0.22
SMAD3-206ENST00000558739 SPTLC1O15269 473 aa13.66□□□□□ -0.22
SMAD3-206ENST00000558739 CYTH3O43739 400 aa13.66□□□□□ -0.22
SMAD3-206ENST00000558739 STAM2O75886 525 aa13.66□□□□□ -0.22
SMAD3-206ENST00000558739 MYBP10242 640 aa13.66□□□□□ -0.22
SMAD3-206ENST00000558739 SRFP11831 508 aa13.66□□□□□ -0.22
SMAD3-206ENST00000558739 KIZQ2M2Z5 673 aa13.66□□□□□ -0.22
SMAD3-206ENST00000558739 PCNX4Q63HM2 1172 aa13.66□□□□□ -0.22
SMAD3-206ENST00000558739 USP17L6PQ6QN14 398 aa13.66□□□□□ -0.22
SMAD3-206ENST00000558739 TSSK4Q6SA08 328 aa13.66□□□□□ -0.22
SMAD3-206ENST00000558739 MTHFD1LQ6UB35 978 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms