RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 IGSF9BQ9UPX0 1349 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 KDM3AQ9Y4C1 1321 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-205ENST00000558700 IGLV3-22A0A075B6J6 115 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 SMIM35A0A1B0GVV1 85 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 FAM86B1E9PN63 330 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 IPO5O00410 1097 aaKnown RBP9.14□□□□□ -0.95
TRAF3-205ENST00000558700 HBP1O60381 514 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 ATG7O95352 703 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 CYP3A4P08684 503 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 FAM86B2P0C5J1 330 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 IFNAR1P17181 557 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 CTNNB1P35222 781 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 KCNQ1P51787 676 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 KRT76Q01546 638 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 VAC14Q08AM6 782 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 PROX2Q3B8N5 592 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 ZNF746Q6NUN9 644 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-205ENST00000558700 PDXDC2PQ6P474 469 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 FAM43BQ6ZT52 329 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-205ENST00000558700 SMAP1Q8IYB5 467 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-205ENST00000558700 TRIM22Q8IYM9 498 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 FIBCD1Q8N539 461 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 ATP8B4Q8TF62 1192 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 CRYGNQ8WXF5 182 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 PHKBQ93100 1093 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 MRPL38Q96DV4 380 aaKnown RBP9.14□□□□□ -0.95
TRAF3-205ENST00000558700 IL17RAQ96F46 866 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 KCNK17Q96T54 332 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 ZNF577Q9BSK1 485 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 C11orf84Q9BUA3 381 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-205ENST00000558700 SLC26A6Q9BXS9 759 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 FTHL17Q9BXU8 183 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 UBE2ZQ9H832 354 aaPredicted RBP9.14□□□□□ -0.95
TRAF3-205ENST00000558700 SCUBE2Q9NQ36 999 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 ZNF302Q9NR11 478 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 TBC1D22BQ9NU19 505 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 PCDHA2Q9Y5H9 948 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 REV3LO60673 3130 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 NCOR1O75376 2440 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 BRWD1Q9NSI6 2320 aa9.14□□□□□ -0.95
TRAF3-205ENST00000558700 IGKV6D-21A0A0A0MT36 114 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 H3BNC9 293 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 CCNE2O96020 404 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 STAG3L1P0CL83 205 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 BMP1P13497 986 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 CD52P31358 61 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 EVCP57679 992 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 PAK2Q13177 524 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 GPM6BQ13491 265 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 PKN1Q16512 942 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 ZNF484Q5JVG2 852 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 ODR4Q5SWX8 454 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 MTHFD1LQ6UB35 978 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 ABHD15Q6UXT9 468 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 NPAS4Q8IUM7 802 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 CCDC60Q8IWA6 550 aaPredicted RBP9.13□□□□□ -0.95
TRAF3-205ENST00000558700 TMEM192Q8IY95 271 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 CKAP2LQ8IYA6 745 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 TRAPPC12Q8WVT3 735 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 FAM167AQ96KS9 214 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 C22orf23Q9BZE7 217 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 LMAN2LQ9H0V9 348 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 RC3H2Q9HBD1 1191 aaKnown RBP9.13□□□□□ -0.95
TRAF3-205ENST00000558700 SH3GLB2Q9NR46 395 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 KIAA1468Q9P260 1216 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 PCDHGC3Q9UN70 934 aa9.13□□□□□ -0.95
TRAF3-205ENST00000558700 VCANP13611 3396 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 WDR64B1ANS9 1081 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 C5orf67F2Z3F1 127 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 CPLX1O14810 134 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 PSAPP07602 524 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 PDIA3P30101 505 aaKnown RBP9.12□□□□□ -0.95
TRAF3-205ENST00000558700 CIITAP33076 1130 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 TMEM62Q0P6H9 643 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 BTG3Q14201 252 aaPredicted RBP9.12□□□□□ -0.95
TRAF3-205ENST00000558700 NTRK3Q16288 839 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 PRR16Q569H4 304 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 CPLX2Q6PUV4 134 aaKnown RBP9.12□□□□□ -0.95
TRAF3-205ENST00000558700 RUFY3Q7L099 469 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 FAM177A1Q8N128 213 aaPredicted RBP9.12□□□□□ -0.95
TRAF3-205ENST00000558700 NME8Q8N427 588 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 RASGRP4Q8TDF6 673 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 LINC01599Q8WXQ3 324 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 ZBTB10Q96DT7 871 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 NECAB3Q96P71 396 aaPredicted RBP9.12□□□□□ -0.95
TRAF3-205ENST00000558700 CELF4Q9BZC1 486 aaKnown RBP9.12□□□□□ -0.95
TRAF3-205ENST00000558700 NSUN3Q9H649 340 aaKnown RBP9.12□□□□□ -0.95
TRAF3-205ENST00000558700 NCOA5Q9HCD5 579 aaKnown RBP9.12□□□□□ -0.95
TRAF3-205ENST00000558700 VPS54Q9P1Q0 977 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 CEP131Q9UPN4 1083 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 SAMM50Q9Y512 469 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 CYP46A1Q9Y6A2 500 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 SPTBN5Q9NRC6 3674 aaKnown RBP9.12□□□□□ -0.95
TRAF3-205ENST00000558700 EVPLQ92817 2033 aa9.12□□□□□ -0.95
TRAF3-205ENST00000558700 RBAK-RBAKDNI3L0D1 243 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 SNPHO15079 494 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 DHX15O43143 795 aaKnown RBP9.11□□□□□ -0.95
TRAF3-205ENST00000558700 DEXIO95424 95 aa9.11□□□□□ -0.95
TRAF3-205ENST00000558700 RB1P06400 928 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms