RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 LENG9Q96B70 501 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 ZNF577Q9BSK1 485 aa11.54□□□□□ -0.56
TPM1-212ENST00000558347 TTC12Q9H892 705 aaPredicted RBP11.54□□□□□ -0.56
TPM1-212ENST00000558347 EPOPA6NHQ4 379 aa11.53□□□□□ -0.56
TPM1-212ENST00000558347 RFXAPO00287 272 aa11.53□□□□□ -0.56
TPM1-212ENST00000558347 EFCAB14O75071 495 aa11.53□□□□□ -0.56
TPM1-212ENST00000558347 GJB5O95377 273 aa11.53□□□□□ -0.56
TPM1-212ENST00000558347 ZNF75DP51815 510 aa11.53□□□□□ -0.56
TPM1-212ENST00000558347 SETQ01105 290 aaPredicted RBP11.53□□□□□ -0.56
TPM1-212ENST00000558347 NR5A1Q13285 461 aa11.53□□□□□ -0.56
TPM1-212ENST00000558347 CAMK4Q16566 473 aa11.53□□□□□ -0.56
TPM1-212ENST00000558347 STX1AQ16623 288 aa11.53□□□□□ -0.56
TPM1-212ENST00000558347 TPRNQ4KMQ1 711 aa11.53□□□□□ -0.56
TPM1-212ENST00000558347 PRR16Q569H4 304 aa11.53□□□□□ -0.56
TPM1-212ENST00000558347 TAF2Q6P1X5 1199 aa11.53□□□□□ -0.56
TPM1-212ENST00000558347 DNAJB3Q8WWF6 145 aa11.53□□□□□ -0.56
TPM1-212ENST00000558347 TRPC6Q9Y210 931 aa11.53□□□□□ -0.56
TPM1-212ENST00000558347 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.52□□□□□ -0.57
TPM1-212ENST00000558347 A0A1W2PQ27 194 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 A0A1W2PQ64 194 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 A0A1W2PQD8 194 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 POTEB3A0JP26 581 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 RRN3P2A6NIE6 340 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 ATP4AP20648 1035 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 IGFBP4P22692 258 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 ZNF165P49910 485 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 FAM160A1Q05DH4 1040 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 RILPL1Q5EBL4 403 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 DNTTIP2Q5QJE6 756 aaKnown RBP11.52□□□□□ -0.57
TPM1-212ENST00000558347 FAM117BQ6P1L5 589 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 POTEBQ6S5H4 581 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 CKAP2LQ8IYA6 745 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 MYOCDQ8IZQ8 938 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 TBCKQ8TEA7 893 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 PPM1EQ8WY54 764 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 SEPT8Q92599 483 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 FAM49AQ9H0Q0 323 aaPredicted RBP11.52□□□□□ -0.57
TPM1-212ENST00000558347 KCNF1Q9H3M0 494 aa11.52□□□□□ -0.57
TPM1-212ENST00000558347 BACH1O14867 736 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 MSH4O15457 936 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 YEATS4O95619 227 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 GHRP10912 638 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 TRAPPC10P48553 1259 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 USP11P51784 963 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 COL4A4P53420 1690 aaPredicted RBP11.51□□□□□ -0.57
TPM1-212ENST00000558347 PLCB2Q00722 1185 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 SWSAP1Q6NVH7 229 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 LUZP1Q86V48 1076 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 ENGASEQ8NFI3 743 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 ARNTL2Q8WYA1 636 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 GJA10Q969M2 543 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 ZNF830Q96NB3 372 aaPredicted RBP11.51□□□□□ -0.57
TPM1-212ENST00000558347 USP28Q96RU2 1077 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 RAD9AQ99638 391 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 IFIH1Q9BYX4 1025 aaKnown RBP11.51□□□□□ -0.57
TPM1-212ENST00000558347 PRDM6Q9NQX0 595 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 ZNF302Q9NR11 478 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 TBC1D22BQ9NU19 505 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 ANO10Q9NW15 660 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 CDY2AQ9Y6F7 541 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 MORC2Q9Y6X9 1032 aaPredicted RBP11.51□□□□□ -0.57
TPM1-212ENST00000558347 WDR81Q562E7 1941 aa11.51□□□□□ -0.57
TPM1-212ENST00000558347 NEMFO60524 1076 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 KINO60870 393 aaKnown RBP11.5□□□□□ -0.57
TPM1-212ENST00000558347 AMHP03971 560 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 SLC26A2P50443 739 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 TMEM62Q0P6H9 643 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 LPIN1Q14693 890 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 IQCB1Q15051 598 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 CCDC85BQ15834 202 aaPredicted RBP11.5□□□□□ -0.57
TPM1-212ENST00000558347 FBXO47Q5MNV8 452 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 FAM160B1Q5W0V3 765 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 ZNF746Q6NUN9 644 aaPredicted RBP11.5□□□□□ -0.57
TPM1-212ENST00000558347 MIS18BP1Q6P0N0 1132 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 MTHFD1LQ6UB35 978 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 KRT25Q7Z3Z0 450 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 RSPH3Q86UC2 560 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 KCNG4Q8TDN1 519 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 ATP8B4Q8TF62 1192 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 APBB2Q92870 758 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 PCDHA2Q9Y5H9 948 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 LOXHD1Q8IVV2 1947 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 MYH9P35579 1960 aaKnown RBP11.5□□□□□ -0.57
TPM1-212ENST00000558347 LINC01553A4QN01 128 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 ZBTB42B2RXF5 422 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 GOLGA6L19H0YKK7 550 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 DLL1O00548 723 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 HBP1O60381 514 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 TDP2O95551 362 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 TOB1P50616 345 aaPredicted RBP11.5□□□□□ -0.57
TPM1-212ENST00000558347 MRPS6P82932 125 aaKnown RBP11.5□□□□□ -0.57
TPM1-212ENST00000558347 HTRA4P83105 476 aaPredicted RBP11.5□□□□□ -0.57
TPM1-212ENST00000558347 KRT76Q01546 638 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 SNW1Q13573 536 aaKnown RBP11.5□□□□□ -0.57
TPM1-212ENST00000558347 EARS2Q5JPH6 523 aaKnown RBP11.5□□□□□ -0.57
TPM1-212ENST00000558347 ADALQ6DHV7 355 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 PDXDC2PQ6P474 469 aa11.5□□□□□ -0.57
TPM1-212ENST00000558347 SMAP1Q8IYB5 467 aaPredicted RBP11.5□□□□□ -0.57
TPM1-212ENST00000558347 LINC00301Q8NCQ3 95 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms