RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 TRMT1Q9NXH9 659 aaKnown RBP8.87□□□□□ -0.99
RTF1-205ENST00000558298 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.87□□□□□ -0.99
RTF1-205ENST00000558298 GGA2Q9UJY4 613 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 TBX21Q9UL17 535 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 HAS3O00219 553 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 SOX1O00570 391 aaPredicted RBP8.86□□□□□ -0.99
RTF1-205ENST00000558298 KIAA0355O15063 1070 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 DYNC1LI2O43237 492 aaPredicted RBP8.86□□□□□ -0.99
RTF1-205ENST00000558298 EDIL3O43854 480 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 KIAA0754O94854 1291 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 YEATS4O95619 227 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 CD4P01730 458 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 CCDC175P0C221 793 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 SSR1P43307 286 aaKnown RBP8.86□□□□□ -0.99
RTF1-205ENST00000558298 NLRP12P59046 1061 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 NLRP5P59047 1200 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 IRX1P78414 480 aaPredicted RBP8.86□□□□□ -0.99
RTF1-205ENST00000558298 BEX3Q00994 111 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 TLE2Q04725 743 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 FAAP100Q0VG06 881 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 SLMAPQ14BN4 828 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 DGKDQ16760 1214 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 Q4G0T1 1027 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 GNASQ5JWF2 1037 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 ADALQ6DHV7 355 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 WDR93Q6P2C0 686 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 SEPT14Q6ZU15 432 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 TMC6Q7Z403 805 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 FAM126BQ8IXS8 530 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 AFAP1L1Q8TED9 768 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 CHAMP1Q96JM3 812 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 LARP6Q9BRS8 491 aaKnown RBP8.86□□□□□ -0.99
RTF1-205ENST00000558298 MTG1Q9BT17 334 aaPredicted RBP8.86□□□□□ -0.99
RTF1-205ENST00000558298 ALG1Q9BT22 464 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 KATNAL1Q9BW62 490 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 CARD6Q9BX69 1037 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 PARD6BQ9BYG5 372 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 STARD7Q9NQZ5 370 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 KCNH7Q9NS40 1196 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 VPS18Q9P253 973 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 KIAA1468Q9P260 1216 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 KAT6AQ92794 2004 aa8.86□□□□□ -0.99
RTF1-205ENST00000558298 IGKV6D-21A0A0A0MT36 114 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 TARSL2A2RTX5 802 aaKnown RBP8.85□□□□□ -0.99
RTF1-205ENST00000558298 FAM86B1E9PN63 330 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 ARVCFO00192 962 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 TBX3O15119 743 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 JAK2O60674 1132 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 LGR5O75473 907 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 ATG7O95352 703 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 GGPS1O95749 300 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 CLTBP09497 229 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 FAM86B2P0C5J1 330 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 MYCLP12524 364 aaPredicted RBP8.85□□□□□ -0.99
RTF1-205ENST00000558298 KRT2P35908 639 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 TRAPPC10P48553 1259 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 SLC26A2P50443 739 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 MNAT1P51948 309 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 MYL5Q02045 173 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 SP2Q02086 613 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 LMNB2Q03252 620 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 RBL2Q08999 1139 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 RESTQ13127 1097 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 NONOQ15233 471 aaKnown RBP eCLIP8.85□□□□□ -0.99
RTF1-205ENST00000558298 LY6KQ17RY6 165 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 HSDL1Q3SXM5 330 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 LRIT3Q3SXY7 679 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 TRIM65Q6PJ69 517 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 B3GNT9Q6UX72 402 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 BRAPQ7Z569 592 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 YTHDF3Q7Z739 585 aaKnown RBP8.85□□□□□ -0.99
RTF1-205ENST00000558298 DHX37Q8IY37 1157 aaKnown RBP8.85□□□□□ -0.99
RTF1-205ENST00000558298 AOPEPQ8N6M6 819 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 RDM1Q8NG50 284 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 CABS1Q96KC9 395 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 AIFM3Q96NN9 605 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 RIT2Q99578 217 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 GPR20Q99678 358 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 FOXP1Q9H334 677 aaPredicted RBP8.85□□□□□ -0.99
RTF1-205ENST00000558298 AGO4Q9HCK5 861 aaKnown RBP8.85□□□□□ -0.99
RTF1-205ENST00000558298 TBC1D22BQ9NU19 505 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 ATP11BQ9Y2G3 1177 aa8.85□□□□□ -0.99
RTF1-205ENST00000558298 LOXHD1Q8IVV2 1947 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 A0A1B0GUA9 196 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 TRIM66O15016 1216 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 ADAMTS3O15072 1205 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 CHUKO15111 745 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 DHX15O43143 795 aaKnown RBP8.84□□□□□ -0.99
RTF1-205ENST00000558298 SHOX2O60902 331 aaPredicted RBP8.84□□□□□ -0.99
RTF1-205ENST00000558298 RPLP2P05387 115 aaKnown RBP8.84□□□□□ -0.99
RTF1-205ENST00000558298 GNG11P61952 73 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 TRIM29Q14134 588 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 BEND6Q5SZJ8 279 aaPredicted RBP8.84□□□□□ -0.99
RTF1-205ENST00000558298 KRT40Q6A162 431 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 ZNF746Q6NUN9 644 aaPredicted RBP8.84□□□□□ -0.99
RTF1-205ENST00000558298 CXCL17Q6UXB2 119 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 NEK8Q86SG6 692 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 PACS2Q86VP3 889 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 VSTM4Q8IW00 320 aa8.84□□□□□ -0.99
RTF1-205ENST00000558298 TDHQ8IZJ6 230 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms