RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 DHX33Q9H6R0 707 aaKnown RBP11.66□□□□□ -0.54
LRRC28-204ENST00000558172 TMEM39AQ9NV64 488 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 KCND2Q9NZV8 630 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 PRKAG2Q9UGJ0 569 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 USP25Q9UHP3 1055 aa11.66□□□□□ -0.54
LRRC28-204ENST00000558172 DNAH12Q6ZR08 3092 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 A0A087WWV3 80 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 TMEM150BA6NC51 233 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 GOLGA6L22H0YM25 854 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 PITPNM1O00562 1244 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 PLA2G4BP0C869 781 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 CYP11B2P19099 503 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 RBL2Q08999 1139 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 IER5Q5VY09 327 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 PADI6Q6TGC4 694 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 KCNK18Q7Z418 384 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 METTL13Q8N6R0 699 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 LINC01465Q8N7H1 131 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 MCPH1Q8NEM0 835 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 LARP4BQ92615 738 aaKnown RBP11.65□□□□□ -0.54
LRRC28-204ENST00000558172 CTAGE1Q96RT6 745 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 MTRQ99707 1265 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 SH2D3AQ9BRG2 576 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 TIPINQ9BVW5 301 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 PANK2Q9BZ23 570 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 LRRC27Q9C0I9 530 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 SUGCTQ9HAC7 445 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 ATP6V0A4Q9HBG4 840 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 PDLIM7Q9NR12 457 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 BLOC1S4Q9NUP1 217 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 KCNH3Q9ULD8 1083 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 HPSEQ9Y251 543 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 NR2E3Q9Y5X4 410 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 CEP290O15078 2479 aa11.65□□□□□ -0.54
LRRC28-204ENST00000558172 TANC1Q9C0D5 1861 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 A0A1B0GVL5 298 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 KIAA0355O15063 1070 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 POLR2DO15514 142 aaKnown RBP11.64□□□□□ -0.55
LRRC28-204ENST00000558172 ASAP2O43150 1006 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 PARNO95453 639 aaKnown RBP11.64□□□□□ -0.55
LRRC28-204ENST00000558172 SSBP05455 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
LRRC28-204ENST00000558172 PFKFB1P16118 471 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 SYKP43405 635 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 SLC12A3P55017 1021 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 AMPD3Q01432 767 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 EMC2Q15006 297 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 RINT1Q6NUQ1 792 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 SV2BQ7L1I2 683 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 PDILTQ8N807 584 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 FSIP1Q8NA03 581 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 DNAJB3Q8WWF6 145 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 MAP7D2Q96T17 732 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 MAGEF1Q9HAY2 307 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 BMP2KQ9NSY1 1161 aaPredicted RBP11.64□□□□□ -0.55
LRRC28-204ENST00000558172 KCNG1Q9UIX4 513 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 TBX21Q9UL17 535 aa11.64□□□□□ -0.55
LRRC28-204ENST00000558172 A0A087X0B3 334 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 M0QZ92 97 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 USO1O60763 962 aaKnown RBP11.63□□□□□ -0.55
LRRC28-204ENST00000558172 PRPF40AO75400 957 aaKnown RBP11.63□□□□□ -0.55
LRRC28-204ENST00000558172 CAPN15O75808 1086 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 TIMP1P01033 207 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 RAG1P15918 1043 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 GUCY2CP25092 1073 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 THPOP40225 353 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 UBE2HP62256 183 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 MCM6Q14566 821 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 MXD4Q14582 209 aaPredicted RBP11.63□□□□□ -0.55
LRRC28-204ENST00000558172 E2F4Q16254 413 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 TRIM71Q2Q1W2 868 aaKnown RBP11.63□□□□□ -0.55
LRRC28-204ENST00000558172 NAALADL2Q58DX5 795 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 FAM26DQ5JW98 314 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 RUFY4Q6ZNE9 571 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 C1orf186Q6ZWK4 172 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 CEP57L1Q8IYX8 460 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 C7orf61Q8IZ16 206 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 KIAA0319LQ8IZA0 1049 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 LRRC71Q8N4P6 559 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 PSPC1Q8WXF1 523 aaKnown RBP11.63□□□□□ -0.55
LRRC28-204ENST00000558172 DHX38Q92620 1227 aaKnown RBP11.63□□□□□ -0.55
LRRC28-204ENST00000558172 DHX58Q96C10 678 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 CCDC34Q96HJ3 373 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 NOC4LQ9BVI4 516 aaKnown RBP11.63□□□□□ -0.55
LRRC28-204ENST00000558172 TNMDQ9H2S6 317 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 HIPK3Q9H422 1215 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 PRDM5Q9NQX1 630 aaPredicted RBP11.63□□□□□ -0.55
LRRC28-204ENST00000558172 SUCLA2Q9P2R7 463 aaPredicted RBP11.63□□□□□ -0.55
LRRC28-204ENST00000558172 AKT3Q9Y243 479 aa11.63□□□□□ -0.55
LRRC28-204ENST00000558172 SCN5AQ14524 2016 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 RSPH10B2B2RC85 870 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 SLFN14P0C7P3 912 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 RSPH10BP0C881 870 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 CKBP12277 381 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 SELPP16109 830 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 ARL2P36404 184 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 CLCN3P51790 818 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 NDUFA8P51970 172 aa11.62□□□□□ -0.55
LRRC28-204ENST00000558172 MRPS6P82932 125 aaKnown RBP11.62□□□□□ -0.55
LRRC28-204ENST00000558172 MKRN4PQ13434 485 aaPredicted RBP11.62□□□□□ -0.55
LRRC28-204ENST00000558172 DHX8Q14562 1220 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms