RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CNOT11Q9UKZ1 510 aaKnown RBP4.84□□□□□ -1.63
SPG11-206ENST00000558093 NR2E1Q9Y466 385 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 SPO11Q9Y5K1 396 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 SLC4A7Q9Y6M7 1214 aa4.84□□□□□ -1.63
SPG11-206ENST00000558093 CNOT4O95628 575 aaKnown RBP4.83□□□□□ -1.64
SPG11-206ENST00000558093 RAC3P60763 192 aa4.83□□□□□ -1.64
SPG11-206ENST00000558093 DSG1Q02413 1049 aa4.83□□□□□ -1.64
SPG11-206ENST00000558093 ADCY1Q08828 1119 aa4.83□□□□□ -1.64
SPG11-206ENST00000558093 PCOLCEQ15113 449 aa4.83□□□□□ -1.64
SPG11-206ENST00000558093 EPHA7Q15375 998 aa4.83□□□□□ -1.64
SPG11-206ENST00000558093 SPATS1Q496A3 300 aa4.83□□□□□ -1.64
SPG11-206ENST00000558093 TIGD7Q6NT04 549 aaPredicted RBP4.83□□□□□ -1.64
SPG11-206ENST00000558093 FILIP1Q7Z7B0 1213 aa4.83□□□□□ -1.64
SPG11-206ENST00000558093 EFHBQ8N7U6 833 aa4.83□□□□□ -1.64
SPG11-206ENST00000558093 GIMAP8Q8ND71 665 aaPredicted RBP4.83□□□□□ -1.64
SPG11-206ENST00000558093 FOXRED1Q96CU9 486 aaPredicted RBP4.83□□□□□ -1.64
SPG11-206ENST00000558093 MAML3Q96JK9 1138 aa4.83□□□□□ -1.64
SPG11-206ENST00000558093 ORAI3Q9BRQ5 295 aa4.83□□□□□ -1.64
SPG11-206ENST00000558093 SMPD4Q9NXE4 827 aa4.83□□□□□ -1.64
SPG11-206ENST00000558093 PPP4R1LQ9P1A2 415 aa4.83□□□□□ -1.64
SPG11-206ENST00000558093 MAFGO15525 162 aa4.82□□□□□ -1.64
SPG11-206ENST00000558093 CD40P25942 277 aa4.82□□□□□ -1.64
SPG11-206ENST00000558093 HSD3B2P26439 372 aa4.82□□□□□ -1.64
SPG11-206ENST00000558093 BUD31P41223 144 aaPredicted RBP4.82□□□□□ -1.64
SPG11-206ENST00000558093 MRE11P49959 708 aa4.82□□□□□ -1.64
SPG11-206ENST00000558093 GYS2P54840 703 aa4.82□□□□□ -1.64
SPG11-206ENST00000558093 EIF4HQ15056 248 aaKnown RBP4.82□□□□□ -1.64
SPG11-206ENST00000558093 SEPT7Q16181 437 aaKnown RBP4.82□□□□□ -1.64
SPG11-206ENST00000558093 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
SPG11-206ENST00000558093 AGBL4Q5VU57 503 aa4.82□□□□□ -1.64
SPG11-206ENST00000558093 ESRP1Q6NXG1 681 aaKnown RBP4.82□□□□□ -1.64
SPG11-206ENST00000558093 PHYKPLQ8IUZ5 450 aa4.82□□□□□ -1.64
SPG11-206ENST00000558093 OR5AN1Q8NGI8 311 aa4.82□□□□□ -1.64
SPG11-206ENST00000558093 RTF1Q92541 710 aaKnown RBP4.82□□□□□ -1.64
SPG11-206ENST00000558093 C16orf92Q96LL3 132 aa4.82□□□□□ -1.64
SPG11-206ENST00000558093 MTFR1LQ9H019 292 aa4.82□□□□□ -1.64
SPG11-206ENST00000558093 C12orf65Q9H3J6 166 aaKnown RBP4.82□□□□□ -1.64
SPG11-206ENST00000558093 POFUT1Q9H488 388 aa4.82□□□□□ -1.64
SPG11-206ENST00000558093 SEC61A2Q9H9S3 476 aa4.82□□□□□ -1.64
SPG11-206ENST00000558093 SAE1Q9UBE0 346 aaPredicted RBP4.82□□□□□ -1.64
SPG11-206ENST00000558093 ST20-MTHFSA0A0A6YYL1 179 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 FAM83GA6ND36 823 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 GSG1L2A8MUP6 293 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 ARHGAP6O43182 974 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 CDC14BO60729 498 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 ADCY2Q08462 1091 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 DGKDQ16760 1214 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 RNF151Q2KHN1 245 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 CT47A1Q5JQC4 288 aaPredicted RBP4.81□□□□□ -1.64
SPG11-206ENST00000558093 CREB3L3Q68CJ9 461 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 USP30Q70CQ3 517 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 LARP4Q71RC2 724 aaKnown RBP eCLIP4.81□□□□□ -1.64
SPG11-206ENST00000558093 SMC1BQ8NDV3 1235 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 USP7Q93009 1102 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 FERMT2Q96AC1 680 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 NEIL1Q96FI4 390 aaPredicted RBP4.81□□□□□ -1.64
SPG11-206ENST00000558093 C8orf49Q96NF6 230 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 SAMD11Q96NU1 681 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 GNRHR2Q96P88 292 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 PTPN18Q99952 460 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 MEGF9Q9H1U4 602 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 OR10A2Q9H208 303 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 PUF60Q9UHX1 559 aaKnown RBP4.81□□□□□ -1.64
SPG11-206ENST00000558093 MAGEL2Q9UJ55 1249 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 MAPRE3Q9UPY8 281 aa4.81□□□□□ -1.64
SPG11-206ENST00000558093 RAB11FIP3O75154 756 aa4.8□□□□□ -1.64
SPG11-206ENST00000558093 MAFO75444 373 aaPredicted RBP4.8□□□□□ -1.64
SPG11-206ENST00000558093 FKBP9O95302 570 aa4.8□□□□□ -1.64
SPG11-206ENST00000558093 SOX5P35711 763 aa4.8□□□□□ -1.64
SPG11-206ENST00000558093 LSSP48449 732 aa4.8□□□□□ -1.64
SPG11-206ENST00000558093 BCAR1P56945 870 aa4.8□□□□□ -1.64
SPG11-206ENST00000558093 SESN2P58004 480 aaPredicted RBP4.8□□□□□ -1.64
SPG11-206ENST00000558093 EFEMP1Q12805 493 aa4.8□□□□□ -1.64
SPG11-206ENST00000558093 NOLC1Q14978 699 aaKnown RBP eCLIP4.8□□□□□ -1.64
SPG11-206ENST00000558093 FKBP9P1Q75LS8 142 aa4.8□□□□□ -1.64
SPG11-206ENST00000558093 OR14K1Q8NGZ2 314 aa4.8□□□□□ -1.64
SPG11-206ENST00000558093 RBM15Q96T37 977 aaKnown RBP eCLIP4.8□□□□□ -1.64
SPG11-206ENST00000558093 DPYSL5Q9BPU6 564 aa4.8□□□□□ -1.64
SPG11-206ENST00000558093 MYL10Q9BUA6 226 aa4.8□□□□□ -1.64
SPG11-206ENST00000558093 POLR3BQ9NW08 1133 aaPredicted RBP4.8□□□□□ -1.64
SPG11-206ENST00000558093 KCMF1Q9P0J7 381 aa4.8□□□□□ -1.64
SPG11-206ENST00000558093 SYNPO2Q9UMS6 1093 aa4.8□□□□□ -1.64
SPG11-206ENST00000558093 OAZ3Q9UMX2 235 aa4.8□□□□□ -1.64
SPG11-206ENST00000558093 A0A087X0B3 334 aa4.79□□□□□ -1.64
SPG11-206ENST00000558093 GPR42O15529 346 aa4.79□□□□□ -1.64
SPG11-206ENST00000558093 H2AFYO75367 372 aaKnown RBP4.79□□□□□ -1.64
SPG11-206ENST00000558093 PRPF6O94906 941 aaKnown RBP4.79□□□□□ -1.64
SPG11-206ENST00000558093 CR2P20023 1033 aa4.79□□□□□ -1.64
SPG11-206ENST00000558093 LSP1P33241 339 aa4.79□□□□□ -1.64
SPG11-206ENST00000558093 ADCYAP1R1P41586 468 aa4.79□□□□□ -1.64
SPG11-206ENST00000558093 MAGEA10P43363 369 aaPredicted RBP4.79□□□□□ -1.64
SPG11-206ENST00000558093 ADAM15Q13444 863 aa4.79□□□□□ -1.64
SPG11-206ENST00000558093 MYBPC3Q14896 1274 aa4.79□□□□□ -1.64
SPG11-206ENST00000558093 DDB1Q16531 1140 aa4.79□□□□□ -1.64
SPG11-206ENST00000558093 TRIM68Q6AZZ1 485 aa4.79□□□□□ -1.64
SPG11-206ENST00000558093 KLHDC10Q6PID8 442 aa4.79□□□□□ -1.64
SPG11-206ENST00000558093 ESPNLQ6ZVH7 1005 aa4.79□□□□□ -1.64
SPG11-206ENST00000558093 TAX1BP1Q86VP1 789 aa4.79□□□□□ -1.64
SPG11-206ENST00000558093 TTC9BQ8N6N2 239 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms