RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 LRFN3Q9BTN0 628 aa15.37■□□□□ 0.05
SNRPA1-204ENST00000558020 TEKT3Q9BXF9 490 aa15.37■□□□□ 0.05
SNRPA1-204ENST00000558020 TM6SF1Q9BZW5 370 aa15.37■□□□□ 0.05
SNRPA1-204ENST00000558020 IGFLR1Q9H665 355 aa15.37■□□□□ 0.05
SNRPA1-204ENST00000558020 ATP6V0A4Q9HBG4 840 aa15.37■□□□□ 0.05
SNRPA1-204ENST00000558020 NCOA5Q9HCD5 579 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-204ENST00000558020 PCDHA4Q9UN74 947 aa15.37■□□□□ 0.05
SNRPA1-204ENST00000558020 AKT3Q9Y243 479 aa15.37■□□□□ 0.05
SNRPA1-204ENST00000558020 HCN4Q9Y3Q4 1203 aa15.37■□□□□ 0.05
SNRPA1-204ENST00000558020 MSH4O15457 936 aa15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 HOXA2O43364 376 aa15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 PPFIA3O75145 1194 aa15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 VTNP04004 478 aa15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 ZSCAN20P17040 1043 aaPredicted RBP15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 NLRP11P59045 1033 aaKnown RBP15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 UBE3AQ05086 875 aa15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 RDM1Q8NG50 284 aa15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 SPPL3Q8TCT6 385 aa15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 MICAL1Q8TDZ2 1067 aa15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 SLC5A5Q92911 643 aa15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 LENG9Q96B70 501 aa15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 POP1Q99575 1024 aaKnown RBP15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 OSMRQ99650 979 aa15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 ELAC1Q9H777 363 aaKnown RBP15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 CD320Q9NPF0 282 aa15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 TMEM161AQ9NX61 479 aa15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 ARIH1Q9Y4X5 557 aaPredicted RBP15.36■□□□□ 0.05
SNRPA1-204ENST00000558020 LOXHD1Q8IVV2 1947 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 EVPLQ92817 2033 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 FSD2A1L4K1 749 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 TBKBP1A7MCY6 615 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 C9IYK1 514 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 ADAMTS3O15072 1205 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 GPR32O75388 356 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 CDKL5O76039 1030 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 OATP04181 439 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 ITGB1P05556 798 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 NEFLP07196 543 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 EIF4BP23588 611 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 LTBRP36941 435 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 DNM2P50570 870 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 FAM189BP81408 668 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 TBC1D8BQ0IIM8 1120 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 ADAM15Q13444 863 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 Q4G0T1 1027 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 PDE12Q6L8Q7 609 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 ADHFE1Q8IWW8 467 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 BLIDQ8IZY5 108 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 TBCKQ8TEA7 893 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 POF1BQ8WVV4 589 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 TMEM40Q8WWA1 233 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 SCLT1Q96NL6 688 aa15.35■□□□□ 0.05
SNRPA1-204ENST00000558020 MYO7AQ13402 2215 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 CYP3A7-CYP3A51PA0A087WV96 503 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 CHMP2AO43633 222 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 MGEA5O60502 916 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 XBP1P17861 261 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 CYP3A7P24462 503 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 NDUFV1P49821 464 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 CLCN3P51790 818 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 PRKCEQ02156 737 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 TOB2Q14106 344 aaPredicted RBP15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 MIER3Q7Z3K6 550 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 ABI1Q8IZP0 508 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 FAM122AQ96E09 287 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 PPP1R16BQ96T49 567 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 PDRG1Q9NUG6 133 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 PUF60Q9UHX1 559 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 CD207Q9UJ71 328 aa15.34■□□□□ 0.05
SNRPA1-204ENST00000558020 CSPG5O95196 566 aa15.33■□□□□ 0.04
SNRPA1-204ENST00000558020 SMAD4Q13485 552 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-204ENST00000558020 CAMK1Q14012 370 aa15.33■□□□□ 0.04
SNRPA1-204ENST00000558020 SMAD2Q15796 467 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-204ENST00000558020 XKR3Q5GH77 459 aa15.33■□□□□ 0.04
SNRPA1-204ENST00000558020 FAM102BQ5T8I3 360 aa15.33■□□□□ 0.04
SNRPA1-204ENST00000558020 MOXD1Q6UVY6 613 aa15.33■□□□□ 0.04
SNRPA1-204ENST00000558020 FAM228AQ86W67 206 aa15.33■□□□□ 0.04
SNRPA1-204ENST00000558020 THNSL1Q8IYQ7 743 aa15.33■□□□□ 0.04
SNRPA1-204ENST00000558020 EFHBQ8N7U6 833 aa15.33■□□□□ 0.04
SNRPA1-204ENST00000558020 TLE6Q9H808 572 aa15.33■□□□□ 0.04
SNRPA1-204ENST00000558020 TYW1Q9NV66 732 aaKnown RBP15.33■□□□□ 0.04
SNRPA1-204ENST00000558020 DACT1Q9NYF0 836 aa15.33■□□□□ 0.04
SNRPA1-204ENST00000558020 ZNF862O60290 1169 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 PSMD10O75832 226 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 LAG3P18627 525 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 DNAJB1P25685 340 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 GATMP50440 423 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 ZP2Q05996 745 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 STK3Q13188 491 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 DSC3Q14574 896 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 NONOQ15233 471 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 CLUL1Q15846 466 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 KRT25Q7Z3Z0 450 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 LRRC71Q8N4P6 559 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 DAGLBQ8NCG7 672 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 NLRP7Q8WX94 980 aa15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 KHSRPQ92945 711 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■■■□□ 16
SNRPA1-204ENST00000558020 JPH2Q9BR39 696 aaPredicted RBP15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 NIFKQ9BYG3 293 aaKnown RBP15.32■□□□□ 0.04
SNRPA1-204ENST00000558020 TMEM117Q9H0C3 514 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms