RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ZDHHC9Q9Y397 364 aa15.26■□□□□ 0.03
SHMT2-234ENST00000557703 CUTAO60888 179 aa15.25■□□□□ 0.03
SHMT2-234ENST00000557703 BAIAP3O94812 1187 aa15.25■□□□□ 0.03
SHMT2-234ENST00000557703 EYA4O95677 639 aa15.25■□□□□ 0.03
SHMT2-234ENST00000557703 CABP7Q86V35 215 aa15.25■□□□□ 0.03
SHMT2-234ENST00000557703 ZNF410Q86VK4 478 aa15.25■□□□□ 0.03
SHMT2-234ENST00000557703 MMTAG2Q9BU76 263 aaKnown RBP15.25■□□□□ 0.03
SHMT2-234ENST00000557703 CELF4Q9BZC1 486 aaKnown RBP15.25■□□□□ 0.03
SHMT2-234ENST00000557703 UBE2OQ9C0C9 1292 aaKnown RBP15.25■□□□□ 0.03
SHMT2-234ENST00000557703 PRO3102Q9H379 93 aa15.25■□□□□ 0.03
SHMT2-234ENST00000557703 KIAA1024Q9UPX6 916 aa15.25■□□□□ 0.03
SHMT2-234ENST00000557703 EVPLQ92817 2033 aa15.25■□□□□ 0.03
SHMT2-234ENST00000557703 CSF2RAP15509 400 aa15.24■□□□□ 0.03
SHMT2-234ENST00000557703 MARCKSP29966 332 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-234ENST00000557703 CRYBB1P53674 252 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-234ENST00000557703 CCL23P55773 120 aa15.24■□□□□ 0.03
SHMT2-234ENST00000557703 TRAF7Q6Q0C0 670 aa15.24■□□□□ 0.03
SHMT2-234ENST00000557703 RUFY4Q6ZNE9 571 aa15.24■□□□□ 0.03
SHMT2-234ENST00000557703 TRMT1LQ7Z2T5 733 aaKnown RBP15.24■□□□□ 0.03
SHMT2-234ENST00000557703 TRAPPC12Q8WVT3 735 aa15.24■□□□□ 0.03
SHMT2-234ENST00000557703 PSPC1Q8WXF1 523 aaKnown RBP15.24■□□□□ 0.03
SHMT2-234ENST00000557703 MTRQ99707 1265 aa15.24■□□□□ 0.03
SHMT2-234ENST00000557703 SUGCTQ9HAC7 445 aa15.24■□□□□ 0.03
SHMT2-234ENST00000557703 C17orf75Q9HAS0 396 aa15.24■□□□□ 0.03
SHMT2-234ENST00000557703 ATP6V0A4Q9HBG4 840 aa15.24■□□□□ 0.03
SHMT2-234ENST00000557703 DDX19AQ9NUU7 478 aaKnown RBP15.24■□□□□ 0.03
SHMT2-234ENST00000557703 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-234ENST00000557703 TFIP11Q9UBB9 837 aaKnown RBP15.24■□□□□ 0.03
SHMT2-234ENST00000557703 STK17AQ9UEE5 414 aa15.24■□□□□ 0.03
SHMT2-234ENST00000557703 TRPV2Q9Y5S1 764 aa15.24■□□□□ 0.03
SHMT2-234ENST00000557703 LTBP2Q14767 1821 aa15.24■□□□□ 0.03
SHMT2-234ENST00000557703 ABHD14A-ACY1A0A1B0GW23 586 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 ARHGEF35A5YM69 484 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 SLC34A2O95436 690 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 FGBP02675 491 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 CHRNA1P02708 482 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 CYP11B2P19099 503 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 SCP2P22307 547 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 NPEPPSP55786 919 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 MDM2Q00987 491 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-234ENST00000557703 CEBPZQ03701 1054 aaKnown RBP15.23■□□□□ 0.03
SHMT2-234ENST00000557703 DNM1Q05193 864 aaKnown RBP15.23■□□□□ 0.03
SHMT2-234ENST00000557703 MGAT3Q09327 533 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 EMC2Q15006 297 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 TMEM119Q4V9L6 283 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 CNKSR3Q6P9H4 555 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 POTEGQ6S5H5 508 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 CCDC73Q6ZRK6 1079 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 PIGOQ8TEQ8 1089 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 PPP1R13LQ8WUF5 828 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 WNT8BQ93098 351 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 FTHL17Q9BXU8 183 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 FAM49AQ9H0Q0 323 aaPredicted RBP15.23■□□□□ 0.03
SHMT2-234ENST00000557703 CSRNP2Q9H175 543 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 CUEDC2Q9H467 287 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 CHMP5Q9NZZ3 219 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 AKT3Q9Y243 479 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 MYH15Q9Y2K3 1946 aa15.23■□□□□ 0.03
SHMT2-234ENST00000557703 UMODL1Q5DID0 1318 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 PHLPP2Q6ZVD8 1323 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 GPR182O15218 404 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 CSPP1Q1MSJ5 1256 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 PLEKHG4Q58EX7 1191 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 FBXO47Q5MNV8 452 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 PADI6Q6TGC4 694 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 TSHZ1Q6ZSZ6 1077 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 TDHQ8IZJ6 230 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 SYT2Q8N9I0 419 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-234ENST00000557703 RASSF8Q8NHQ8 419 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 HERVK_113Q902F9 699 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 SEPT8Q92599 483 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 KIFAP3Q92845 792 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 SPATA32Q96LK8 384 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 NFKBIZQ9BYH8 718 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 FTOQ9C0B1 505 aaKnown RBP eCLIP15.22■□□□□ 0.03
SHMT2-234ENST00000557703 BHMT2Q9H2M3 363 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 SUCLA2Q9P2R7 463 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-234ENST00000557703 RBM19Q9Y4C8 960 aaKnown RBP15.22■□□□□ 0.03
SHMT2-234ENST00000557703 CDY2AQ9Y6F7 541 aa15.22■□□□□ 0.03
SHMT2-234ENST00000557703 RANBP2P49792 3224 aaKnown RBP15.21■□□□□ 0.03
SHMT2-234ENST00000557703 TANC1Q9C0D5 1861 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 GPR32O75388 356 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 EIF4BP23588 611 aaKnown RBP15.21■□□□□ 0.03
SHMT2-234ENST00000557703 CDC25AP30304 524 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 ME1P48163 572 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 GPC3P51654 580 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 GRB10Q13322 594 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 IKBKEQ14164 716 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 TFDP1Q14186 410 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 PPP2R5AQ15172 486 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 ECM1Q16610 540 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 TMEM240Q5SV17 173 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 FOXD4L5Q5VV16 416 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-234ENST00000557703 PLA2G4FQ68DD2 849 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 ADALQ6DHV7 355 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 SRGAP1Q7Z6B7 1085 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 PHOSPHO2Q8TCD6 241 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 FOXD4L4Q8WXT5 416 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-234ENST00000557703 SCLYQ96I15 445 aa15.21■□□□□ 0.03
SHMT2-234ENST00000557703 IPO9Q96P70 1041 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms