RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 PIGSQ96S52 555 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 SFXN1Q9H9B4 322 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 MAD2L2Q9UI95 211 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 CDV3Q9UKY7 258 aaKnown RBP11.94□□□□□ -0.5
TRAV33-201ENST00000557514 ST3GAL5Q9UNP4 418 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 IRAK3Q9Y616 596 aa11.94□□□□□ -0.5
TRAV33-201ENST00000557514 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.93□□□□□ -0.5
TRAV33-201ENST00000557514 PALM3A6NDB9 673 aaPredicted RBP11.93□□□□□ -0.5
TRAV33-201ENST00000557514 B4E1Z4 1266 aa11.93□□□□□ -0.5
TRAV33-201ENST00000557514 SPTLC1O15269 473 aa11.93□□□□□ -0.5
TRAV33-201ENST00000557514 CFHP08603 1231 aa11.93□□□□□ -0.5
TRAV33-201ENST00000557514 DSC3Q14574 896 aa11.93□□□□□ -0.5
TRAV33-201ENST00000557514 PLCB4Q15147 1175 aa11.93□□□□□ -0.5
TRAV33-201ENST00000557514 PHLDB3Q6NSJ2 640 aa11.93□□□□□ -0.5
TRAV33-201ENST00000557514 MAML2Q8IZL2 1156 aaPredicted RBP11.93□□□□□ -0.5
TRAV33-201ENST00000557514 GPR161Q8N6U8 529 aaKnown RBP11.93□□□□□ -0.5
TRAV33-201ENST00000557514 SLC22A17Q8WUG5 538 aa11.93□□□□□ -0.5
TRAV33-201ENST00000557514 RTKNQ9BST9 563 aa11.93□□□□□ -0.5
TRAV33-201ENST00000557514 ZBP1Q9H171 429 aa11.93□□□□□ -0.5
TRAV33-201ENST00000557514 RIOX1Q9H6W3 641 aa11.93□□□□□ -0.5
TRAV33-201ENST00000557514 GINS2Q9Y248 185 aa11.93□□□□□ -0.5
TRAV33-201ENST00000557514 MYH7BA7E2Y1 1941 aa11.93□□□□□ -0.5
TRAV33-201ENST00000557514 MYO10Q9HD67 2058 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 POTEMA6NI47 508 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 PRR5-ARHGAP8B1AHC4 643 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 GPR182O15218 404 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 CYTH3O43739 400 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 N4BP1O75113 896 aaKnown RBP11.92□□□□□ -0.5
TRAV33-201ENST00000557514 DCNP07585 359 aaKnown RBP11.92□□□□□ -0.5
TRAV33-201ENST00000557514 ITGB5P18084 799 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 RFX1P22670 979 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 ARHGAP8P85298 464 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 COL9A2Q14055 689 aaPredicted RBP11.92□□□□□ -0.5
TRAV33-201ENST00000557514 SPECC1Q5M775 1068 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 VARS2Q5ST30 1063 aaKnown RBP11.92□□□□□ -0.5
TRAV33-201ENST00000557514 ODR4Q5SWX8 454 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 POTEGQ6S5H5 508 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 CABP7Q86V35 215 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 FAM228AQ86W67 206 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 TICAM2Q86XR7 235 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 TNPO1Q92973 898 aaKnown RBP11.92□□□□□ -0.5
TRAV33-201ENST00000557514 CDHR5Q9HBB8 845 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 ARHGEF3Q9NR81 526 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 NCDNQ9UBB6 729 aa11.92□□□□□ -0.5
TRAV33-201ENST00000557514 PNMA6FA0A0J9YX94 578 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 PIK3CDO00329 1044 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 STK25O00506 426 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 ZNF213O14771 459 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 SRFP11831 508 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 GLULP15104 373 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 NMIQ13287 307 aaPredicted RBP11.91□□□□□ -0.5
TRAV33-201ENST00000557514 LETM2Q2VYF4 491 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 ZNF528Q3MIS6 628 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 CLLU1OSQ5K130 101 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 IFIT1BQ5T764 474 aaKnown RBP11.91□□□□□ -0.5
TRAV33-201ENST00000557514 MTHFD1LQ6UB35 978 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 C15orf39Q6ZRI6 1047 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 TMEM173Q86WV6 379 aaPredicted RBP11.91□□□□□ -0.5
TRAV33-201ENST00000557514 KIAA0319LQ8IZA0 1049 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 ABI1Q8IZP0 508 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 AUTS2Q8WXX7 1259 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 BORCS6Q96GS4 357 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 UBAC1Q9BSL1 405 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 AZI2Q9H6S1 392 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 JPH1Q9HDC5 661 aaPredicted RBP11.91□□□□□ -0.5
TRAV33-201ENST00000557514 ZSWIM5Q9P217 1185 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 RALYQ9UKM9 306 aaKnown RBP11.91□□□□□ -0.5
TRAV33-201ENST00000557514 CA14Q9ULX7 337 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 SIT1Q9Y3P8 196 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 DENND4AQ7Z401 1863 aa11.91□□□□□ -0.5
TRAV33-201ENST00000557514 DCDC2BA2VCK2 349 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 MEIS2O14770 477 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 CXCL14O95715 111 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 CTSAP10619 480 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 TGM1P22735 817 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 POLGP54098 1239 aaPredicted RBP11.9□□□□□ -0.5
TRAV33-201ENST00000557514 MTMR1Q13613 665 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 GIT2Q14161 759 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 BMS1Q14692 1282 aaKnown RBP11.9□□□□□ -0.5
TRAV33-201ENST00000557514 GRM4Q14833 912 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 NONOQ15233 471 aaKnown RBP eCLIP11.9□□□□□ -0.5
TRAV33-201ENST00000557514 SEC23AQ15436 765 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 FNDC1Q4ZHG4 1894 aaPredicted RBP11.9□□□□□ -0.5
TRAV33-201ENST00000557514 USP17L6PQ6QN14 398 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 PLPPR4Q7Z2D5 763 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 VPS52Q8N1B4 723 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 PJA1Q8NG27 643 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 RSAD2Q8WXG1 361 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 TMEM169Q96HH4 297 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 EPS15L1Q9UBC2 864 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 SMG5Q9UPR3 1016 aaKnown RBP11.9□□□□□ -0.5
TRAV33-201ENST00000557514 PCDHGA2Q9Y5H1 932 aa11.9□□□□□ -0.5
TRAV33-201ENST00000557514 CA8P35219 290 aa11.89□□□□□ -0.51
TRAV33-201ENST00000557514 METAP2P50579 478 aaKnown RBP eCLIP11.89□□□□□ -0.51
TRAV33-201ENST00000557514 PPFIBP1Q86W92 1011 aa11.89□□□□□ -0.51
TRAV33-201ENST00000557514 ECHDC2Q86YB7 292 aa11.89□□□□□ -0.51
TRAV33-201ENST00000557514 SLC44A3Q8N4M1 653 aa11.89□□□□□ -0.51
TRAV33-201ENST00000557514 CMASQ8NFW8 434 aaPredicted RBP11.89□□□□□ -0.51
TRAV33-201ENST00000557514 SMARCC2Q8TAQ2 1214 aa11.89□□□□□ -0.51
TRAV33-201ENST00000557514 GPR152Q8TDT2 470 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms