RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 HIDE1A8MVS5 230 aa14.21□□□□□ -0.13
SHMT2-230ENST00000557427 FGF18O76093 207 aa14.21□□□□□ -0.13
SHMT2-230ENST00000557427 SMARCA1P28370 1054 aa14.21□□□□□ -0.13
SHMT2-230ENST00000557427 APOBRQ0VD83 1088 aa14.21□□□□□ -0.13
SHMT2-230ENST00000557427 TOB2Q14106 344 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-230ENST00000557427 ME3Q16798 604 aa14.21□□□□□ -0.13
SHMT2-230ENST00000557427 TSHZ1Q6ZSZ6 1077 aa14.21□□□□□ -0.13
SHMT2-230ENST00000557427 DCLK2Q8N568 766 aa14.21□□□□□ -0.13
SHMT2-230ENST00000557427 DTWD2Q8NBA8 298 aa14.21□□□□□ -0.13
SHMT2-230ENST00000557427 SPZ1Q9BXG8 430 aa14.21□□□□□ -0.13
SHMT2-230ENST00000557427 LIMD1Q9UGP4 676 aa14.21□□□□□ -0.13
SHMT2-230ENST00000557427 BRPF3Q9ULD4 1205 aa14.21□□□□□ -0.13
SHMT2-230ENST00000557427 CDY2AQ9Y6F7 541 aa14.21□□□□□ -0.13
SHMT2-230ENST00000557427 R4GN57 208 aa14.21□□□□□ -0.13
SHMT2-230ENST00000557427 DOCK5Q9H7D0 1870 aa14.21□□□□□ -0.14
SHMT2-230ENST00000557427 ST3GAL1Q11201 340 aa14.2□□□□□ -0.14
SHMT2-230ENST00000557427 SEMA3FQ13275 785 aa14.2□□□□□ -0.14
SHMT2-230ENST00000557427 MARCH8Q5T0T0 291 aa14.2□□□□□ -0.14
SHMT2-230ENST00000557427 MCTP1Q6DN14 999 aa14.2□□□□□ -0.14
SHMT2-230ENST00000557427 SGMS1Q86VZ5 419 aa14.2□□□□□ -0.14
SHMT2-230ENST00000557427 CCDC83Q8IWF9 413 aa14.2□□□□□ -0.14
SHMT2-230ENST00000557427 FEZF2Q8TBJ5 459 aa14.2□□□□□ -0.14
SHMT2-230ENST00000557427 DNAJB3Q8WWF6 145 aa14.2□□□□□ -0.14
SHMT2-230ENST00000557427 ZBTB10Q96DT7 871 aa14.2□□□□□ -0.14
SHMT2-230ENST00000557427 MAP3K20Q9NYL2 800 aaKnown RBP14.2□□□□□ -0.14
SHMT2-230ENST00000557427 MAP1BP46821 2468 aaKnown RBP14.2□□□□□ -0.14
SHMT2-230ENST00000557427 NRCAMQ92823 1304 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 FSD2A1L4K1 749 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 NOP56O00567 594 aaKnown RBP14.19□□□□□ -0.14
SHMT2-230ENST00000557427 ZBTB43O43298 467 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 WEE2P0C1S8 567 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 HOXB8P17481 243 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-230ENST00000557427 RSPO4Q2I0M5 234 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-230ENST00000557427 KLHL40Q2TBA0 621 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 UTP14CQ5TAP6 766 aaKnown RBP14.19□□□□□ -0.14
SHMT2-230ENST00000557427 PLPP4Q5VZY2 271 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 TAF2Q6P1X5 1199 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 USP17L6PQ6QN14 398 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 Q6ZUG5 572 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 CYFIP1Q7L576 1253 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 ZDHHC14Q8IZN3 488 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 SAMD3Q8N6K7 520 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 SMARCC2Q8TAQ2 1214 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 CYP2W1Q8TAV3 490 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 LARP6Q9BRS8 491 aaKnown RBP14.19□□□□□ -0.14
SHMT2-230ENST00000557427 ADAM7Q9H2U9 754 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 TMX1Q9H3N1 280 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 SEMA4AQ9H3S1 761 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 LMBRD1Q9NUN5 540 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 TMEM260Q9NX78 707 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 PCDHB12Q9Y5F1 795 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 MYH15Q9Y2K3 1946 aa14.19□□□□□ -0.14
SHMT2-230ENST00000557427 KLF18A0A0U1RQI7 1052 aa14.18□□□□□ -0.14
SHMT2-230ENST00000557427 MBLAC1A4D2B0 266 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-230ENST00000557427 STAG3L1P0CL83 205 aa14.18□□□□□ -0.14
SHMT2-230ENST00000557427 SCG2P13521 617 aa14.18□□□□□ -0.14
SHMT2-230ENST00000557427 PDE12Q6L8Q7 609 aaKnown RBP14.18□□□□□ -0.14
SHMT2-230ENST00000557427 KANK3Q6NY19 840 aa14.18□□□□□ -0.14
SHMT2-230ENST00000557427 APOA5Q6Q788 366 aa14.18□□□□□ -0.14
SHMT2-230ENST00000557427 METTL7BQ6UX53 244 aa14.18□□□□□ -0.14
SHMT2-230ENST00000557427 TMTC3Q6ZXV5 915 aa14.18□□□□□ -0.14
SHMT2-230ENST00000557427 FBXL16Q8N461 479 aa14.18□□□□□ -0.14
SHMT2-230ENST00000557427 COLGALT1Q8NBJ5 622 aa14.18□□□□□ -0.14
SHMT2-230ENST00000557427 CUL5Q93034 780 aa14.18□□□□□ -0.14
SHMT2-230ENST00000557427 AGXT2Q9BYV1 514 aa14.18□□□□□ -0.14
SHMT2-230ENST00000557427 RTEL1Q9NZ71 1219 aa14.18□□□□□ -0.14
SHMT2-230ENST00000557427 PADI3Q9ULW8 664 aa14.18□□□□□ -0.14
SHMT2-230ENST00000557427 V9GY48 417 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-230ENST00000557427 FNDC1Q4ZHG4 1894 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-230ENST00000557427 KAT6AQ92794 2004 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 GOLGA8AA7E2F4 631 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 GOLGA8BA8MQT2 603 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 STX6O43752 255 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 SRGAP2BP0DMP2 458 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 ZSCAN22P10073 491 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-230ENST00000557427 SYT1P21579 422 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 GJB2P29033 226 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 CCND2P30279 289 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 MRPS9P82933 396 aaKnown RBP14.17□□□□□ -0.14
SHMT2-230ENST00000557427 RTN1Q16799 776 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 FAM102BQ5T8I3 360 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 HEATR3Q7Z4Q2 680 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 THNSL1Q8IYQ7 743 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 TCF25Q9BQ70 676 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 FTHL17Q9BXU8 183 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 CWH43Q9H720 699 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 PSTPIP2Q9H939 334 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 ERVK-5Q9HDB9 667 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 TYW1Q9NV66 732 aaKnown RBP14.17□□□□□ -0.14
SHMT2-230ENST00000557427 RALYQ9UKM9 306 aaKnown RBP14.17□□□□□ -0.14
SHMT2-230ENST00000557427 ZNF215Q9UL58 517 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-230ENST00000557427 MYH6P13533 1939 aa14.17□□□□□ -0.14
SHMT2-230ENST00000557427 GPR179Q6PRD1 2367 aa14.16□□□□□ -0.14
SHMT2-230ENST00000557427 SPATA31C2B4DYI2 1134 aa14.16□□□□□ -0.14
SHMT2-230ENST00000557427 MGEA5O60502 916 aa14.16□□□□□ -0.14
SHMT2-230ENST00000557427 PDCP20941 246 aa14.16□□□□□ -0.14
SHMT2-230ENST00000557427 ADD1P35611 737 aaKnown RBP14.16□□□□□ -0.14
SHMT2-230ENST00000557427 MRPS6P82932 125 aaKnown RBP14.16□□□□□ -0.14
SHMT2-230ENST00000557427 ST3GAL2Q16842 350 aa14.16□□□□□ -0.14
SHMT2-230ENST00000557427 SPOUT1Q5T280 376 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms