RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 KLHL29Q96CT2 875 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 GJD4Q96KN9 370 aaPredicted RBP11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 IFT74Q96LB3 600 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 DHRS1Q96LJ7 313 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 LMCD1Q9NZU5 365 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 CTNNAL1Q9UBT7 734 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 ABCB11O95342 1321 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 PAPPAQ13219 1627 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 BTNL10A8MVZ5 291 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 ZBTB48P10074 688 aaPredicted RBP11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 ATP6V1C1P21283 382 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 CA8P35219 290 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 TUBP50607 506 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 MXRA7P84157 204 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 EHHADHQ08426 723 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 ADAM9Q13443 819 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 TMC4Q7Z404 712 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 CCDC84Q86UT8 332 aaPredicted RBP11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 C4orf32Q8N8J7 132 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 BHMTQ93088 406 aa11.36□□□□□ -0.59
SUPT16H-207ENST00000557394 DOT1LQ8TEK3 1739 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 PABPN1LA6NDY0 278 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 CCDC188H7C350 402 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 KRT38O76015 456 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 SNRPA1P09661 255 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 KLRC1P26715 233 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 SKIV2L2P42285 1042 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 CABP4P57796 275 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 DHX9Q08211 1270 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 RRP12Q5JTH9 1297 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 IFNL3Q8IZI9 196 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 GABPB2Q8TAK5 448 aaPredicted RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 FAM81AQ8TBF8 368 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 SYN2Q92777 582 aaPredicted RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 IFT43Q96FT9 208 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 ZNF496Q96IT1 587 aaPredicted RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 SYT15Q9BQS2 421 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 MTFR1LQ9H019 292 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 EPB41L4BQ9H329 900 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 ZHX3Q9H4I2 956 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 SLITRK6Q9H5Y7 841 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 PIDD1Q9HB75 910 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 LUC7LQ9NQ29 371 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 FAM207AQ9NSI2 230 aaPredicted RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 PACSIN2Q9UNF0 486 aaPredicted RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 C2CD2Q9Y426 696 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 ZNF532Q9HCE3 1301 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 O00370 1275 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 DAPK3O43293 454 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 ZNF24P17028 368 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 PDE6CP51160 858 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 RNASE9P60153 205 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 CUL3Q13618 768 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 HHATQ5VTY9 493 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 CCDC174Q6PII3 467 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 MFSD6Q6ZSS7 791 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 RELL1Q8IUW5 271 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 KIAA1958Q8N8K9 716 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 RBM41Q96IZ5 413 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 SLC7A5P2Q9GIP4 190 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 PIH1D3Q9NQM4 214 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 FAM114A2Q9NRY5 505 aa11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 USP15Q9Y4E8 981 aaPredicted RBP11.35□□□□□ -0.59
SUPT16H-207ENST00000557394 UBR2Q8IWV8 1755 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 UPP2O95045 317 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 BAG3O95817 575 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 CCNB1P14635 433 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 PDE6AP16499 860 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 USP11P51784 963 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 C10orf62Q5T681 223 aaPredicted RBP11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 AGAP9Q5VTM2 703 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 DTNBP1Q96EV8 351 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 ZKSCAN3Q9BRR0 538 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 NAPBQ9H115 298 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 INTS9Q9NV88 658 aaKnown RBP11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 COMMD8Q9NX08 183 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 PRDM1O75626 825 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 GJB6O95452 261 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 SERPING1P05155 500 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 ACADSP16219 412 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 HOXA10P31260 410 aaPredicted RBP11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 DNA2P51530 1060 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 NSUN2Q08J23 767 aaKnown RBP eCLIP11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 RPS6KA1Q15418 735 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 SEC23AQ15436 765 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 MAN2A1Q16706 1144 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 TNFAIP8L3Q5GJ75 292 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 ZNF772Q68DY9 489 aaPredicted RBP11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 TMEM110Q86TL2 294 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 COL23A1Q86Y22 540 aaPredicted RBP11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 TRIM42Q8IWZ5 723 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 RBM12BQ8IXT5 1001 aaKnown RBP11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 KIF2BQ8N4N8 673 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 TBC1D16Q8TBP0 767 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 ANKS1AQ92625 1134 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 EEF2KMTQ96G04 330 aa11.34□□□□□ -0.59
SUPT16H-207ENST00000557394 FAM81BQ96LP2 452 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms