RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 IGKV6-21A0A0C4DH24 114 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 TMEM150BA6NC51 233 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 GAS2O43903 313 aaKnown RBP13.96□□□□□ -0.17
SLIRP-209ENST00000557342 MAFO75444 373 aaPredicted RBP13.96□□□□□ -0.17
SLIRP-209ENST00000557342 VTNP04004 478 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 HSP90AA1P07900 732 aaKnown RBP13.96□□□□□ -0.17
SLIRP-209ENST00000557342 XRCC6P12956 609 aaKnown RBP eCLIP13.96□□□□□ -0.17
SLIRP-209ENST00000557342 RFC5P40937 340 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 CLCN3P51790 818 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 PAK2Q13177 524 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 PDIA5Q14554 519 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 TCTN1Q2MV58 587 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 HAUS3Q68CZ6 603 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 PLA2G4FQ68DD2 849 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 HERC6Q8IVU3 1022 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 DEFB123Q8N688 67 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 SLC7A3Q8WY07 619 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 CCDC43Q96MW1 224 aaKnown RBP13.96□□□□□ -0.17
SLIRP-209ENST00000557342 POLR3CQ9BUI4 534 aaPredicted RBP13.96□□□□□ -0.17
SLIRP-209ENST00000557342 OSBPL7Q9BZF2 842 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 ANKEF1Q9NU02 776 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 WRAP73Q9P2S5 460 aaPredicted RBP13.96□□□□□ -0.17
SLIRP-209ENST00000557342 GINS2Q9Y248 185 aa13.96□□□□□ -0.17
SLIRP-209ENST00000557342 GPR182O15218 404 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 GPR32O75388 356 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 RPS6KA5O75582 802 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 BMP15O95972 392 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 PDIA4P13667 645 aaKnown RBP13.95□□□□□ -0.18
SLIRP-209ENST00000557342 SYT1P21579 422 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 MUTP22033 750 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 RPA1P27694 616 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 CD52P31358 61 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 PBX2P40425 430 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 RABGGTBP53611 331 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 POLGP54098 1239 aaPredicted RBP13.95□□□□□ -0.18
SLIRP-209ENST00000557342 NPEPPSP55786 919 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 NLRP11P59045 1033 aaKnown RBP13.95□□□□□ -0.18
SLIRP-209ENST00000557342 DEFB103AP81534 67 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 MKRN4PQ13434 485 aaPredicted RBP13.95□□□□□ -0.18
SLIRP-209ENST00000557342 KIZQ2M2Z5 673 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 XKR9Q5GH70 373 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 DTHD1Q6ZMT9 781 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 TCP11Q8WWU5 503 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 SH2D3AQ9BRG2 576 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 ZBED2Q9BTP6 218 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 DHX33Q9H6R0 707 aaKnown RBP13.95□□□□□ -0.18
SLIRP-209ENST00000557342 AGO3Q9H9G7 860 aaKnown RBP13.95□□□□□ -0.18
SLIRP-209ENST00000557342 SLC28A3Q9HAS3 691 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 LRWD1Q9UFC0 647 aa13.95□□□□□ -0.18
SLIRP-209ENST00000557342 TLL1O43897 1013 aa13.94□□□□□ -0.18
SLIRP-209ENST00000557342 GPC3P51654 580 aa13.94□□□□□ -0.18
SLIRP-209ENST00000557342 TTC3P53804 2025 aa13.94□□□□□ -0.18
SLIRP-209ENST00000557342 ATP2C1P98194 919 aaPredicted RBP13.94□□□□□ -0.18
SLIRP-209ENST00000557342 NFX1Q12986 1120 aaKnown RBP13.94□□□□□ -0.18
SLIRP-209ENST00000557342 ARL6IP4Q66PJ3 421 aaKnown RBP13.94□□□□□ -0.18
SLIRP-209ENST00000557342 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.94□□□□□ -0.18
SLIRP-209ENST00000557342 CATSPER3Q86XQ3 398 aa13.94□□□□□ -0.18
SLIRP-209ENST00000557342 MYOCDQ8IZQ8 938 aa13.94□□□□□ -0.18
SLIRP-209ENST00000557342 SCLT1Q96NL6 688 aa13.94□□□□□ -0.18
SLIRP-209ENST00000557342 NACC1Q96RE7 527 aa13.94□□□□□ -0.18
SLIRP-209ENST00000557342 OSMRQ99650 979 aa13.94□□□□□ -0.18
SLIRP-209ENST00000557342 SEMA6BQ9H3T3 888 aa13.94□□□□□ -0.18
SLIRP-209ENST00000557342 ZNF576Q9H609 170 aa13.94□□□□□ -0.18
SLIRP-209ENST00000557342 SUCLA2Q9P2R7 463 aaPredicted RBP13.94□□□□□ -0.18
SLIRP-209ENST00000557342 PADI3Q9ULW8 664 aa13.94□□□□□ -0.18
SLIRP-209ENST00000557342 STX6O43752 255 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 MED24O75448 989 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 DGAT1O75907 488 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 GJB5O95377 273 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 SPATA31C1P0DKV0 1188 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 EIF4BP23588 611 aaKnown RBP13.93□□□□□ -0.18
SLIRP-209ENST00000557342 KRT79Q5XKE5 535 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 Q7L0L9 218 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 FERMT3Q86UX7 667 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 ZNF410Q86VK4 478 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 IGSF22Q8N9C0 903 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 NLRP7Q8WX94 980 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 TOP1MTQ969P6 601 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 PPP1R16BQ96T49 567 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 RAD9AQ99638 391 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 MTRQ99707 1265 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 GCOM2Q9BZD3 368 aaPredicted RBP13.93□□□□□ -0.18
SLIRP-209ENST00000557342 NKX2-4Q9H2Z4 354 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 ADAMTS10Q9H324 1103 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 ZSCAN16Q9H4T2 348 aaPredicted RBP13.93□□□□□ -0.18
SLIRP-209ENST00000557342 CDHR5Q9HBB8 845 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 ERVK-5Q9HDB9 667 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
SLIRP-209ENST00000557342 MTMR10Q9NXD2 777 aa13.93□□□□□ -0.18
SLIRP-209ENST00000557342 DBR1Q9UK59 544 aaKnown RBP13.93□□□□□ -0.18
SLIRP-209ENST00000557342 YBX2Q9Y2T7 364 aaKnown RBP13.93□□□□□ -0.18
SLIRP-209ENST00000557342 NOC2LQ9Y3T9 749 aaKnown RBP13.93□□□□□ -0.18
SLIRP-209ENST00000557342 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.92□□□□□ -0.18
SLIRP-209ENST00000557342 ENPP3O14638 875 aa13.92□□□□□ -0.18
SLIRP-209ENST00000557342 ZBTB39O15060 712 aa13.92□□□□□ -0.18
SLIRP-209ENST00000557342 ASAP2O43150 1006 aa13.92□□□□□ -0.18
SLIRP-209ENST00000557342 CCT6AP40227 531 aaKnown RBP13.92□□□□□ -0.18
SLIRP-209ENST00000557342 RARRES1P49788 294 aa13.92□□□□□ -0.18
SLIRP-209ENST00000557342 DRP2Q13474 957 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms