RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 FAM20AQ96MK3 541 aa18.6■□□□□ 0.57
VSX1-207ENST00000557285 FTHL17Q9BXU8 183 aa18.6■□□□□ 0.57
VSX1-207ENST00000557285 ERVK-5Q9HDB9 667 aa18.6■□□□□ 0.57
VSX1-207ENST00000557285 ST3GAL5Q9UNP4 418 aa18.6■□□□□ 0.57
VSX1-207ENST00000557285 TTC3P53804 2025 aa18.6■□□□□ 0.57
VSX1-207ENST00000557285 DENND3A2RUS2 1198 aa18.59■□□□□ 0.57
VSX1-207ENST00000557285 BAG4O95429 457 aaKnown RBP18.59■□□□□ 0.57
VSX1-207ENST00000557285 CRYBB1P53674 252 aaPredicted RBP18.59■□□□□ 0.57
VSX1-207ENST00000557285 NLRP11P59045 1033 aaKnown RBP18.59■□□□□ 0.57
VSX1-207ENST00000557285 PPP2R5CQ13362 524 aa18.59■□□□□ 0.57
VSX1-207ENST00000557285 PAN2Q504Q3 1202 aaKnown RBP18.59■□□□□ 0.57
VSX1-207ENST00000557285 EPC2Q52LR7 807 aa18.59■□□□□ 0.57
VSX1-207ENST00000557285 XKR3Q5GH77 459 aa18.59■□□□□ 0.57
VSX1-207ENST00000557285 FIBCD1Q8N539 461 aa18.59■□□□□ 0.57
VSX1-207ENST00000557285 C8orf76Q96K31 380 aa18.59■□□□□ 0.57
VSX1-207ENST00000557285 THEGQ9P2T0 379 aa18.59■□□□□ 0.57
VSX1-207ENST00000557285 SQORQ9Y6N5 450 aa18.59■□□□□ 0.57
VSX1-207ENST00000557285 ADGRA3Q8IWK6 1321 aa18.58■□□□□ 0.57
VSX1-207ENST00000557285 WNT7AO00755 349 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 MGEA5O60502 916 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 GPR32O75388 356 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 CSPG5O95196 566 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 CTNNB1P35222 781 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 PSMC5P62195 406 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 CYP4A11Q02928 519 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 DRP2Q13474 957 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 BTG3Q14201 252 aaPredicted RBP18.58■□□□□ 0.56
VSX1-207ENST00000557285 SAFBQ15424 915 aaKnown RBP eCLIP18.58■□□□□ 0.56
VSX1-207ENST00000557285 CALCRLQ16602 461 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 FAM228AQ86W67 206 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 TMEM192Q8IY95 271 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 FAM184AQ8NB25 1140 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 NLRP7Q8WX94 980 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 ZSCAN31Q96LW9 406 aaPredicted RBP18.58■□□□□ 0.56
VSX1-207ENST00000557285 ADAM2Q99965 735 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 COL25A1Q9BXS0 654 aaPredicted RBP18.58■□□□□ 0.56
VSX1-207ENST00000557285 TSPYL2Q9H2G4 693 aaPredicted RBP18.58■□□□□ 0.56
VSX1-207ENST00000557285 UPF2Q9HAU5 1272 aaKnown RBP18.58■□□□□ 0.56
VSX1-207ENST00000557285 LRFN2Q9ULH4 789 aa18.58■□□□□ 0.56
VSX1-207ENST00000557285 GPR182O15218 404 aa18.57■□□□□ 0.56
VSX1-207ENST00000557285 NEMFO60524 1076 aa18.57■□□□□ 0.56
VSX1-207ENST00000557285 STBD1O95210 358 aa18.57■□□□□ 0.56
VSX1-207ENST00000557285 QARSP47897 775 aaKnown RBP18.57■□□□□ 0.56
VSX1-207ENST00000557285 RBM25P49756 843 aaKnown RBP18.57■□□□□ 0.56
VSX1-207ENST00000557285 GATMP50440 423 aa18.57■□□□□ 0.56
VSX1-207ENST00000557285 LLPHQ9BRT6 129 aaKnown RBP18.57■□□□□ 0.56
VSX1-207ENST00000557285 NIFKQ9BYG3 293 aaKnown RBP18.57■□□□□ 0.56
VSX1-207ENST00000557285 SH2B1Q9NRF2 756 aaPredicted RBP18.57■□□□□ 0.56
VSX1-207ENST00000557285 BMP2KQ9NSY1 1161 aaPredicted RBP18.57■□□□□ 0.56
VSX1-207ENST00000557285 RGL1Q9NZL6 768 aa18.57■□□□□ 0.56
VSX1-207ENST00000557285 XIRP2A4UGR9 3374 aa18.57■□□□□ 0.56
VSX1-207ENST00000557285 RALGAPA2Q2PPJ7 1873 aa18.56■□□□□ 0.56
VSX1-207ENST00000557285 TBX3O15119 743 aa18.56■□□□□ 0.56
VSX1-207ENST00000557285 FGFR4P22455 802 aa18.56■□□□□ 0.56
VSX1-207ENST00000557285 NPEPPSP55786 919 aa18.56■□□□□ 0.56
VSX1-207ENST00000557285 GNL2Q13823 731 aaKnown RBP18.56■□□□□ 0.56
VSX1-207ENST00000557285 CTTNQ14247 550 aaKnown RBP18.56■□□□□ 0.56
VSX1-207ENST00000557285 TARBP2Q15633 366 aaKnown RBP18.56■□□□□ 0.56
VSX1-207ENST00000557285 ANO5Q75V66 913 aa18.56■□□□□ 0.56
VSX1-207ENST00000557285 NPAS4Q8IUM7 802 aa18.56■□□□□ 0.56
VSX1-207ENST00000557285 SLFN12Q8IYM2 578 aa18.56■□□□□ 0.56
VSX1-207ENST00000557285 LINC01465Q8N7H1 131 aa18.56■□□□□ 0.56
VSX1-207ENST00000557285 DYDC2Q96IM9 177 aa18.56■□□□□ 0.56
VSX1-207ENST00000557285 LXNQ9BS40 222 aa18.56■□□□□ 0.56
VSX1-207ENST00000557285 ADAMTS10Q9H324 1103 aa18.56■□□□□ 0.56
VSX1-207ENST00000557285 WRAP73Q9P2S5 460 aaPredicted RBP18.56■□□□□ 0.56
VSX1-207ENST00000557285 CSDE1O75534 798 aaKnown RBP18.55■□□□□ 0.56
VSX1-207ENST00000557285 DGKIO75912 1065 aa18.55■□□□□ 0.56
VSX1-207ENST00000557285 P4HBP07237 508 aaKnown RBP18.55■□□□□ 0.56
VSX1-207ENST00000557285 STAG3L1P0CL83 205 aa18.55■□□□□ 0.56
VSX1-207ENST00000557285 POU3F3P20264 500 aaPredicted RBP18.55■□□□□ 0.56
VSX1-207ENST00000557285 MCM7P33993 719 aa18.55■□□□□ 0.56
VSX1-207ENST00000557285 TXKP42681 527 aa18.55■□□□□ 0.56
VSX1-207ENST00000557285 GPC3P51654 580 aa18.55■□□□□ 0.56
VSX1-207ENST00000557285 TFF2Q03403 129 aa18.55■□□□□ 0.56
VSX1-207ENST00000557285 GPM6BQ13491 265 aa18.55■□□□□ 0.56
VSX1-207ENST00000557285 RABEP1Q15276 862 aa18.55■□□□□ 0.56
VSX1-207ENST00000557285 ODR4Q5SWX8 454 aa18.55■□□□□ 0.56
VSX1-207ENST00000557285 TPH2Q8IWU9 490 aa18.55■□□□□ 0.56
VSX1-207ENST00000557285 CEP170P1Q96L14 293 aa18.55■□□□□ 0.56
VSX1-207ENST00000557285 PCDHB7Q9Y5E2 793 aa18.55■□□□□ 0.56
VSX1-207ENST00000557285 COL4A6Q14031 1691 aa18.54■□□□□ 0.56
VSX1-207ENST00000557285 KIAA1671Q9BY89 1806 aa18.54■□□□□ 0.56
VSX1-207ENST00000557285 ST18O60284 1047 aa18.54■□□□□ 0.56
VSX1-207ENST00000557285 SARSP49591 514 aaKnown RBP18.54■□□□□ 0.56
VSX1-207ENST00000557285 DNM2P50570 870 aa18.54■□□□□ 0.56
VSX1-207ENST00000557285 HMGN5P82970 282 aaKnown RBP18.54■□□□□ 0.56
VSX1-207ENST00000557285 EPHA7Q15375 998 aa18.54■□□□□ 0.56
VSX1-207ENST00000557285 RHPN2Q8IUC4 686 aa18.54■□□□□ 0.56
VSX1-207ENST00000557285 ZNF579Q8NAF0 562 aaKnown RBP18.54■□□□□ 0.56
VSX1-207ENST00000557285 IL27Q8NEV9 243 aa18.54■□□□□ 0.56
VSX1-207ENST00000557285 NLRP4Q96MN2 994 aa18.54■□□□□ 0.56
VSX1-207ENST00000557285 SAMD11Q96NU1 681 aa18.54■□□□□ 0.56
VSX1-207ENST00000557285 TTC12Q9H892 705 aaPredicted RBP18.54■□□□□ 0.56
VSX1-207ENST00000557285 RC3H2Q9HBD1 1191 aaKnown RBP18.54■□□□□ 0.56
VSX1-207ENST00000557285 CYP26B1Q9NR63 512 aa18.54■□□□□ 0.56
VSX1-207ENST00000557285 SUCLA2Q9P2R7 463 aaPredicted RBP18.54■□□□□ 0.56
VSX1-207ENST00000557285 PCDHA12Q9UN75 941 aa18.54■□□□□ 0.56
VSX1-207ENST00000557285 MRPL42Q9Y6G3 142 aaKnown RBP18.54■□□□□ 0.56
VSX1-207ENST00000557285 SPTBN5Q9NRC6 3674 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms