RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 PWWP2AQ96N64 755 aa8.43□□□□□ -1.06
LINC00871-204ENST00000556886 GORASP1Q9BQQ3 440 aa8.43□□□□□ -1.06
LINC00871-204ENST00000556886 PDGFDQ9GZP0 370 aaPredicted RBP8.43□□□□□ -1.06
LINC00871-204ENST00000556886 RBPJLQ9UBG7 517 aa8.43□□□□□ -1.06
LINC00871-204ENST00000556886 PMF1-BGLAPU3KQ54 211 aa8.43□□□□□ -1.06
LINC00871-204ENST00000556886 POLR3AO14802 1390 aaPredicted RBP8.43□□□□□ -1.06
LINC00871-204ENST00000556886 QRICH2Q9H0J4 1663 aa8.43□□□□□ -1.06
LINC00871-204ENST00000556886 FAM90A27PA6NNH2 459 aa8.42□□□□□ -1.06
LINC00871-204ENST00000556886 ACOT7O00154 380 aa8.42□□□□□ -1.06
LINC00871-204ENST00000556886 RFXAPO00287 272 aa8.42□□□□□ -1.06
LINC00871-204ENST00000556886 FAHP16930 419 aa8.42□□□□□ -1.06
LINC00871-204ENST00000556886 PTPN1P18031 435 aaKnown RBP8.42□□□□□ -1.06
LINC00871-204ENST00000556886 FLT3P36888 993 aa8.42□□□□□ -1.06
LINC00871-204ENST00000556886 MECP2P51608 486 aaKnown RBP8.42□□□□□ -1.06
LINC00871-204ENST00000556886 CNGB1Q14028 1251 aaPredicted RBP8.42□□□□□ -1.06
LINC00871-204ENST00000556886 TM4SF20Q53R12 229 aa8.42□□□□□ -1.06
LINC00871-204ENST00000556886 CPZQ66K79 652 aa8.42□□□□□ -1.06
LINC00871-204ENST00000556886 CDCA2Q69YH5 1023 aaPredicted RBP8.42□□□□□ -1.06
LINC00871-204ENST00000556886 STK32CQ86UX6 486 aa8.42□□□□□ -1.06
LINC00871-204ENST00000556886 NOSTRINQ8IVI9 506 aa8.42□□□□□ -1.06
LINC00871-204ENST00000556886 IRF2BPLQ9H1B7 796 aa8.42□□□□□ -1.06
LINC00871-204ENST00000556886 NGRNQ9NPE2 291 aaKnown RBP8.42□□□□□ -1.06
LINC00871-204ENST00000556886 WASF3Q9UPY6 502 aa8.42□□□□□ -1.06
LINC00871-204ENST00000556886 ATP23Q9Y6H3 246 aa8.42□□□□□ -1.06
LINC00871-204ENST00000556886 ARHGEF28Q8N1W1 1705 aaKnown RBP8.42□□□□□ -1.06
LINC00871-204ENST00000556886 DBX1A6NMT0 343 aa8.41□□□□□ -1.06
LINC00871-204ENST00000556886 NUAK1O60285 661 aa8.41□□□□□ -1.06
LINC00871-204ENST00000556886 HTRA3P83110 453 aa8.41□□□□□ -1.06
LINC00871-204ENST00000556886 CFAP100Q494V2 611 aa8.41□□□□□ -1.06
LINC00871-204ENST00000556886 BTBD8Q5XKL5 378 aa8.41□□□□□ -1.06
LINC00871-204ENST00000556886 UBE2R2Q712K3 238 aaPredicted RBP8.41□□□□□ -1.06
LINC00871-204ENST00000556886 C2orf69Q8N8R5 385 aa8.41□□□□□ -1.06
LINC00871-204ENST00000556886 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.41□□□□□ -1.06
LINC00871-204ENST00000556886 FNIP1Q8TF40 1166 aa8.41□□□□□ -1.06
LINC00871-204ENST00000556886 DACT3Q96B18 629 aaPredicted RBP8.41□□□□□ -1.06
LINC00871-204ENST00000556886 WNK4Q96J92 1243 aa8.41□□□□□ -1.06
LINC00871-204ENST00000556886 TARS2Q9BW92 718 aaKnown RBP8.41□□□□□ -1.06
LINC00871-204ENST00000556886 RIC8BQ9NVN3 520 aa8.41□□□□□ -1.06
LINC00871-204ENST00000556886 DLC1Q96QB1 1528 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 ANKRD36BQ8N2N9 1353 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 CGNL1Q0VF96 1302 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 SLC12A8A0AV02 714 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 TRAF5O00463 557 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 KPNA6O60684 536 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 ITGA1P56199 1179 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 SEC23AQ15436 765 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 EGFLAMQ63HQ2 1017 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 CIAPIN1Q6FI81 312 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 PROSER1Q86XN7 944 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 CHST14Q8NCH0 376 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 DDX1Q92499 740 aaKnown RBP8.4□□□□□ -1.06
LINC00871-204ENST00000556886 ZBTB8AQ96BR9 441 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 C11orf84Q9BUA3 381 aaPredicted RBP8.4□□□□□ -1.06
LINC00871-204ENST00000556886 HSPBP1Q9NZL4 362 aa8.4□□□□□ -1.06
LINC00871-204ENST00000556886 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.39□□□□□ -1.07
LINC00871-204ENST00000556886 SCDO00767 359 aa8.39□□□□□ -1.07
LINC00871-204ENST00000556886 CLASP2O75122 1294 aaKnown RBP8.39□□□□□ -1.07
LINC00871-204ENST00000556886 POU3F2P20265 443 aaPredicted RBP8.39□□□□□ -1.07
LINC00871-204ENST00000556886 CFPP27918 469 aa8.39□□□□□ -1.07
LINC00871-204ENST00000556886 NEK4P51957 841 aa8.39□□□□□ -1.07
LINC00871-204ENST00000556886 SMAD4Q13485 552 aaKnown RBP8.39□□□□□ -1.07
LINC00871-204ENST00000556886 CD276Q5ZPR3 534 aa8.39□□□□□ -1.07
LINC00871-204ENST00000556886 TMC5Q6UXY8 1006 aa8.39□□□□□ -1.07
LINC00871-204ENST00000556886 OTOP1Q7RTM1 612 aa8.39□□□□□ -1.07
LINC00871-204ENST00000556886 LRRC56Q8IYG6 542 aaPredicted RBP8.39□□□□□ -1.07
LINC00871-204ENST00000556886 TOX2Q96NM4 488 aa8.39□□□□□ -1.07
LINC00871-204ENST00000556886 MTFR1LQ9H019 292 aa8.39□□□□□ -1.07
LINC00871-204ENST00000556886 SLKQ9H2G2 1235 aaPredicted RBP8.39□□□□□ -1.07
LINC00871-204ENST00000556886 RCAN3Q9UKA8 241 aa8.39□□□□□ -1.07
LINC00871-204ENST00000556886 A2ML1A8K2U0 1454 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 MED14O60244 1454 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 YTHDC2Q9H6S0 1430 aaKnown RBP8.38□□□□□ -1.07
LINC00871-204ENST00000556886 ZNF521Q96K83 1311 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 CLTCQ00610 1675 aaKnown RBP8.38□□□□□ -1.07
LINC00871-204ENST00000556886 A0A087X0B3 334 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 CBX4O00257 560 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 MYCLP1P12525 358 aaPredicted RBP8.38□□□□□ -1.07
LINC00871-204ENST00000556886 GJA4P35212 333 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 AFF3P51826 1226 aaKnown RBP8.38□□□□□ -1.07
LINC00871-204ENST00000556886 RRP1P56182 461 aaKnown RBP8.38□□□□□ -1.07
LINC00871-204ENST00000556886 IRF9Q00978 393 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 ADAM9Q13443 819 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 TAF7LQ5H9L4 462 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 LIPIQ6XZB0 460 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 C1QL4Q86Z23 238 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 LINC00482Q8N8I6 264 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 ZSWIM3Q96MP5 696 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 PCDH18Q9HCL0 1135 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 CABP5Q9NP86 173 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 ALKQ9UM73 1620 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 TULP4Q9NRJ4 1543 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 PTPRMP28827 1452 aa8.38□□□□□ -1.07
LINC00871-204ENST00000556886 NSD3Q9BZ95 1437 aa8.37□□□□□ -1.07
LINC00871-204ENST00000556886 ABCC11Q96J66 1382 aa8.37□□□□□ -1.07
LINC00871-204ENST00000556886 PTPDC1A2A3K4 754 aa8.37□□□□□ -1.07
LINC00871-204ENST00000556886 PRAMEF25A6NGN4 478 aa8.37□□□□□ -1.07
LINC00871-204ENST00000556886 GSG1L2A8MUP6 293 aa8.37□□□□□ -1.07
LINC00871-204ENST00000556886 KRT37O76014 449 aa8.37□□□□□ -1.07
LINC00871-204ENST00000556886 CLSTN1O94985 981 aa8.37□□□□□ -1.07
LINC00871-204ENST00000556886 C4BPAP04003 597 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms