RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 FAM228BP0C875 321 aa9.29□□□□□ -0.92
MARK3-210ENST00000556463 AMPD3Q01432 767 aa9.29□□□□□ -0.92
MARK3-210ENST00000556463 MTMR3Q13615 1198 aa9.29□□□□□ -0.92
MARK3-210ENST00000556463 PPP1R15BQ5SWA1 713 aa9.29□□□□□ -0.92
MARK3-210ENST00000556463 GKAP1Q5VSY0 366 aaPredicted RBP9.29□□□□□ -0.92
MARK3-210ENST00000556463 TMEM110Q86TL2 294 aa9.29□□□□□ -0.92
MARK3-210ENST00000556463 ATP8B4Q8TF62 1192 aa9.29□□□□□ -0.92
MARK3-210ENST00000556463 HPS3Q969F9 1004 aa9.29□□□□□ -0.92
MARK3-210ENST00000556463 TCP11L1Q9NUJ3 509 aa9.29□□□□□ -0.92
MARK3-210ENST00000556463 PPP1R1BQ9UD71 204 aaPredicted RBP9.29□□□□□ -0.92
MARK3-210ENST00000556463 STK17AQ9UEE5 414 aa9.29□□□□□ -0.92
MARK3-210ENST00000556463 ASAP1Q9ULH1 1129 aa9.29□□□□□ -0.92
MARK3-210ENST00000556463 PCDHA2Q9Y5H9 948 aa9.29□□□□□ -0.92
MARK3-210ENST00000556463 DDX60LQ5H9U9 1706 aaKnown RBP9.29□□□□□ -0.92
MARK3-210ENST00000556463 ROBO1Q9Y6N7 1651 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 CCT8L1PA6NM43 557 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 FGFR1OPO95684 399 aaKnown RBP9.28□□□□□ -0.92
MARK3-210ENST00000556463 STARD3NLO95772 234 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 TCF3P15923 654 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 IGHMBP2P38935 993 aaKnown RBP9.28□□□□□ -0.92
MARK3-210ENST00000556463 MMP13P45452 471 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 CCNG1P51959 295 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 DYNLL1P63167 89 aaKnown RBP9.28□□□□□ -0.92
MARK3-210ENST00000556463 LMBRD2Q68DH5 695 aaPredicted RBP9.28□□□□□ -0.92
MARK3-210ENST00000556463 IRF2BP2Q7Z5L9 587 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 SLC17A8Q8NDX2 589 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 OR2W6PQ8NHA6 318 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 NLRP7Q8WX94 980 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 MAF1Q9H063 256 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 DCP1AQ9NPI6 582 aaPredicted RBP9.28□□□□□ -0.92
MARK3-210ENST00000556463 UBAP1Q9NZ09 502 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 LRP2BPQ9P2M1 347 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 BCL9O00512 1426 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 PALM3A6NDB9 673 aaPredicted RBP9.28□□□□□ -0.92
MARK3-210ENST00000556463 CCDC188H7C350 402 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 IL2RBP14784 551 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 FXR2P51116 673 aaKnown RBP eCLIP9.28□□□□□ -0.92
MARK3-210ENST00000556463 ASIC1P78348 528 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 MAP7D1Q3KQU3 841 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 GALNTL6Q49A17 601 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 TMEM119Q4V9L6 283 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 CCDC38Q502W7 563 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 SFMBT2Q5VUG0 894 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 MIS18BP1Q6P0N0 1132 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 TRIM59Q8IWR1 403 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 ATL2Q8NHH9 583 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 GPKOWQ92917 476 aaPredicted RBP eCLIP9.28□□□□□ -0.92
MARK3-210ENST00000556463 BEGAINQ9BUH8 593 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 SLITRK6Q9H5Y7 841 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 MMRN2Q9H8L6 949 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 ZFATQ9P243 1243 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 SART1O43290 800 aaKnown RBP9.28□□□□□ -0.92
MARK3-210ENST00000556463 TRIM37O94972 964 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 ATP4AP20648 1035 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 LACTBP83111 547 aaPredicted RBP9.28□□□□□ -0.92
MARK3-210ENST00000556463 CCDC178Q5BJE1 867 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 CDCA2Q69YH5 1023 aaPredicted RBP9.28□□□□□ -0.92
MARK3-210ENST00000556463 UBLCP1Q8WVY7 318 aaPredicted RBP9.28□□□□□ -0.92
MARK3-210ENST00000556463 CHMP6Q96FZ7 201 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 PGM2Q96G03 612 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 GBP5Q96PP8 586 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 PLIN2Q99541 437 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 PACSIN1Q9BY11 444 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 ZDHHC18Q9NUE0 388 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 FBXL5Q9UKA1 691 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 C15orf41Q9Y2V0 281 aa9.28□□□□□ -0.92
MARK3-210ENST00000556463 THRAP3Q9Y2W1 955 aaKnown RBP9.28□□□□□ -0.92
MARK3-210ENST00000556463 TNRC6CQ9HCJ0 1690 aaKnown RBP9.27□□□□□ -0.92
MARK3-210ENST00000556463 A0A0A6YYK5 440 aaPredicted RBP9.27□□□□□ -0.93
MARK3-210ENST00000556463 A0A0G2JS52 829 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 SPDYE3A6NKU9 549 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 USP17L12C9JPN9 530 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 USP17L21D6R901 530 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 DESP17661 470 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 ANXA13P27216 316 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 CTNNA1P35221 906 aaKnown RBP9.27□□□□□ -0.93
MARK3-210ENST00000556463 PSMC4P43686 418 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 ATP11AP98196 1134 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 MTA1Q13330 715 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 TMEM154Q6P9G4 183 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 SPICE1Q8N0Z3 855 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 ANKS4BQ8N8V4 417 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 UHMK1Q8TAS1 419 aaKnown RBP9.27□□□□□ -0.93
MARK3-210ENST00000556463 CEP63Q96MT8 703 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 XPO6Q96QU8 1125 aaKnown RBP9.27□□□□□ -0.93
MARK3-210ENST00000556463 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.27□□□□□ -0.93
MARK3-210ENST00000556463 VRTNQ9H8Y1 702 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 PACSIN2Q9UNF0 486 aaPredicted RBP9.27□□□□□ -0.93
MARK3-210ENST00000556463 CHMP2BQ9UQN3 213 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 AFF2P51816 1311 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 CCDC194A0A1B0GVG4 234 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 HIP1RO75146 1068 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 OSBPP22059 807 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 NPEPPSP55786 919 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 ICA1Q05084 483 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 MPP3Q13368 585 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 ZNF568Q3ZCX4 644 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 CWF19L1Q69YN2 538 aaKnown RBP9.27□□□□□ -0.93
MARK3-210ENST00000556463 CHADLQ6NUI6 762 aa9.27□□□□□ -0.93
MARK3-210ENST00000556463 MORC4Q8TE76 937 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms