RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CLCN3P51790 818 aa25.52■■□□□ 1.68
ACTN1-220ENST00000556433 NAALADL2Q58DX5 795 aa25.52■■□□□ 1.68
ACTN1-220ENST00000556433 SLC24A5Q71RS6 500 aa25.52■■□□□ 1.68
ACTN1-220ENST00000556433 FAM178BQ8IXR5 827 aa25.52■■□□□ 1.68
ACTN1-220ENST00000556433 BLIDQ8IZY5 108 aa25.52■■□□□ 1.68
ACTN1-220ENST00000556433 GJA10Q969M2 543 aa25.52■■□□□ 1.68
ACTN1-220ENST00000556433 UNC45AQ9H3U1 944 aa25.52■■□□□ 1.68
ACTN1-220ENST00000556433 RNF216Q9NWF9 866 aaPredicted RBP25.52■■□□□ 1.68
ACTN1-220ENST00000556433 MYH9P35579 1960 aaKnown RBP25.52■■□□□ 1.68
ACTN1-220ENST00000556433 MMP1P03956 469 aa25.51■■□□□ 1.67
ACTN1-220ENST00000556433 TMOD1P28289 359 aa25.51■■□□□ 1.67
ACTN1-220ENST00000556433 SFNP31947 248 aa25.51■■□□□ 1.67
ACTN1-220ENST00000556433 JAK3P52333 1124 aa25.51■■□□□ 1.67
ACTN1-220ENST00000556433 HYAL1Q12794 435 aa25.51■■□□□ 1.67
ACTN1-220ENST00000556433 Q4G0T1 1027 aa25.51■■□□□ 1.67
ACTN1-220ENST00000556433 FAM228AQ86W67 206 aa25.51■■□□□ 1.67
ACTN1-220ENST00000556433 KLHL23Q8NBE8 558 aa25.51■■□□□ 1.67
ACTN1-220ENST00000556433 SPPL3Q8TCT6 385 aa25.51■■□□□ 1.67
ACTN1-220ENST00000556433 AIFM3Q96NN9 605 aa25.51■■□□□ 1.67
ACTN1-220ENST00000556433 AKT3Q9Y243 479 aa25.51■■□□□ 1.67
ACTN1-220ENST00000556433 C9IYK1 514 aa25.5■■□□□ 1.67
ACTN1-220ENST00000556433 ITGB1P05556 798 aa25.5■■□□□ 1.67
ACTN1-220ENST00000556433 NLRP11P59045 1033 aaKnown RBP25.5■■□□□ 1.67
ACTN1-220ENST00000556433 PRKCEQ02156 737 aa25.5■■□□□ 1.67
ACTN1-220ENST00000556433 CAMK1Q14012 370 aa25.5■■□□□ 1.67
ACTN1-220ENST00000556433 GJD3Q8N144 294 aa25.5■■□□□ 1.67
ACTN1-220ENST00000556433 LRRC71Q8N4P6 559 aa25.5■■□□□ 1.67
ACTN1-220ENST00000556433 KHSRPQ92945 711 aaKnown RBP eCLIP25.5■■□□□ 1.67
ACTN1-220ENST00000556433 MAP7D2Q96T17 732 aa25.5■■□□□ 1.67
ACTN1-220ENST00000556433 IGFLR1Q9H665 355 aa25.5■■□□□ 1.67
ACTN1-220ENST00000556433 CYP3A7-CYP3A51PA0A087WV96 503 aa25.49■■□□□ 1.67
ACTN1-220ENST00000556433 M0R2N6 131 aa25.49■■□□□ 1.67
ACTN1-220ENST00000556433 TDP2O95551 362 aa25.49■■□□□ 1.67
ACTN1-220ENST00000556433 CYP3A7P24462 503 aa25.49■■□□□ 1.67
ACTN1-220ENST00000556433 DNAJB1P25685 340 aa25.49■■□□□ 1.67
ACTN1-220ENST00000556433 UGCGQ16739 394 aa25.49■■□□□ 1.67
ACTN1-220ENST00000556433 FAM102BQ5T8I3 360 aa25.49■■□□□ 1.67
ACTN1-220ENST00000556433 GALNT17Q6IS24 598 aa25.49■■□□□ 1.67
ACTN1-220ENST00000556433 LINC01465Q8N7H1 131 aa25.49■■□□□ 1.67
ACTN1-220ENST00000556433 DAGLBQ8NCG7 672 aa25.49■■□□□ 1.67
ACTN1-220ENST00000556433 RAPGEFL1Q9UHV5 662 aa25.49■■□□□ 1.67
ACTN1-220ENST00000556433 TBKBP1A7MCY6 615 aa25.48■■□□□ 1.67
ACTN1-220ENST00000556433 PSMD10O75832 226 aa25.48■■□□□ 1.67
ACTN1-220ENST00000556433 SSTR3P32745 418 aaPredicted RBP25.48■■□□□ 1.67
ACTN1-220ENST00000556433 LTBRP36941 435 aa25.48■■□□□ 1.67
ACTN1-220ENST00000556433 FAM189BP81408 668 aa25.48■■□□□ 1.67
ACTN1-220ENST00000556433 CTC1Q2NKJ3 1217 aa25.48■■□□□ 1.67
ACTN1-220ENST00000556433 SPOUT1Q5T280 376 aaKnown RBP25.48■■□□□ 1.67
ACTN1-220ENST00000556433 MIER3Q7Z3K6 550 aa25.48■■□□□ 1.67
ACTN1-220ENST00000556433 FAM177A1Q8N128 213 aaPredicted RBP25.48■■□□□ 1.67
ACTN1-220ENST00000556433 ADAMTS10Q9H324 1103 aa25.48■■□□□ 1.67
ACTN1-220ENST00000556433 ATP6V0A4Q9HBG4 840 aa25.48■■□□□ 1.67
ACTN1-220ENST00000556433 FAM50BQ9Y247 325 aa25.48■■□□□ 1.67
ACTN1-220ENST00000556433 GTF2F1P35269 517 aaKnown RBP eCLIP25.47■■□□□ 1.67
ACTN1-220ENST00000556433 DSC3Q14574 896 aa25.47■■□□□ 1.67
ACTN1-220ENST00000556433 NONOQ15233 471 aaKnown RBP eCLIP25.47■■□□□ 1.67
ACTN1-220ENST00000556433 NPY5RQ15761 445 aa25.47■■□□□ 1.67
ACTN1-220ENST00000556433 ZNF710Q8N1W2 664 aa25.47■■□□□ 1.67
ACTN1-220ENST00000556433 RDM1Q8NG50 284 aa25.47■■□□□ 1.67
ACTN1-220ENST00000556433 POF1BQ8WVV4 589 aa25.47■■□□□ 1.67
ACTN1-220ENST00000556433 ZNF668Q96K58 619 aaPredicted RBP25.47■■□□□ 1.67
ACTN1-220ENST00000556433 KCNJ14Q9UNX9 436 aa25.47■■□□□ 1.67
ACTN1-220ENST00000556433 CDKL5O76039 1030 aa25.46■■□□□ 1.67
ACTN1-220ENST00000556433 TBC1D8BQ0IIM8 1120 aa25.46■■□□□ 1.67
ACTN1-220ENST00000556433 SCRN1Q12765 414 aa25.46■■□□□ 1.67
ACTN1-220ENST00000556433 PPP2R3CQ969Q6 453 aa25.46■■□□□ 1.67
ACTN1-220ENST00000556433 SLKQ9H2G2 1235 aaPredicted RBP25.46■■□□□ 1.67
ACTN1-220ENST00000556433 AAASQ9NRG9 546 aa25.46■■□□□ 1.67
ACTN1-220ENST00000556433 TMEM161AQ9NX61 479 aa25.46■■□□□ 1.67
ACTN1-220ENST00000556433 PCDHB12Q9Y5F1 795 aa25.46■■□□□ 1.67
ACTN1-220ENST00000556433 ZSCAN20P17040 1043 aaPredicted RBP25.45■■□□□ 1.66
ACTN1-220ENST00000556433 EIF4BP23588 611 aaKnown RBP25.45■■□□□ 1.66
ACTN1-220ENST00000556433 IRS1P35568 1242 aa25.45■■□□□ 1.66
ACTN1-220ENST00000556433 DLX2Q07687 328 aaPredicted RBP25.45■■□□□ 1.66
ACTN1-220ENST00000556433 CLUL1Q15846 466 aa25.45■■□□□ 1.66
ACTN1-220ENST00000556433 INF2Q27J81 1249 aa25.45■■□□□ 1.66
ACTN1-220ENST00000556433 MOXD1Q6UVY6 613 aa25.45■■□□□ 1.66
ACTN1-220ENST00000556433 KRT25Q7Z3Z0 450 aa25.45■■□□□ 1.66
ACTN1-220ENST00000556433 MBOAT7Q96N66 472 aa25.45■■□□□ 1.66
ACTN1-220ENST00000556433 ELAC1Q9H777 363 aaKnown RBP25.45■■□□□ 1.66
ACTN1-220ENST00000556433 TYW1Q9NV66 732 aaKnown RBP25.45■■□□□ 1.66
ACTN1-220ENST00000556433 PI4K2BG5E9Z4 385 aa25.44■■□□□ 1.66
ACTN1-220ENST00000556433 FGFR1P11362 822 aa25.44■■□□□ 1.66
ACTN1-220ENST00000556433 GPC3P51654 580 aa25.44■■□□□ 1.66
ACTN1-220ENST00000556433 ADAM15Q13444 863 aa25.44■■□□□ 1.66
ACTN1-220ENST00000556433 TARBP2Q15633 366 aaKnown RBP25.44■■□□□ 1.66
ACTN1-220ENST00000556433 XKR3Q5GH77 459 aa25.44■■□□□ 1.66
ACTN1-220ENST00000556433 TMEM31Q5JXX7 168 aa25.44■■□□□ 1.66
ACTN1-220ENST00000556433 B3GNT9Q6UX72 402 aa25.44■■□□□ 1.66
ACTN1-220ENST00000556433 ETNPPLQ8TBG4 499 aa25.44■■□□□ 1.66
ACTN1-220ENST00000556433 SCLT1Q96NL6 688 aa25.44■■□□□ 1.66
ACTN1-220ENST00000556433 LRFN3Q9BTN0 628 aa25.44■■□□□ 1.66
ACTN1-220ENST00000556433 NIFKQ9BYG3 293 aaKnown RBP25.44■■□□□ 1.66
ACTN1-220ENST00000556433 SEPT9Q9UHD8 586 aaPredicted RBP25.44■■□□□ 1.66
ACTN1-220ENST00000556433 DDX25Q9UHL0 483 aaKnown RBP25.44■■□□□ 1.66
ACTN1-220ENST00000556433 LINC01565O15544 149 aa25.43■■□□□ 1.66
ACTN1-220ENST00000556433 LETM2Q2VYF4 491 aa25.43■■□□□ 1.66
ACTN1-220ENST00000556433 MTERF2Q49AM1 385 aa25.43■■□□□ 1.66
ACTN1-220ENST00000556433 PHF20Q9BVI0 1012 aa25.43■■□□□ 1.66
ACTN1-220ENST00000556433 TPCN1Q9ULQ1 816 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms