RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 SEPT9Q9UHD8 586 aaPredicted RBP16.11■□□□□ 0.17
CUX1-215ENST00000556210 RASAL2Q9UJF2 1139 aa16.11■□□□□ 0.17
CUX1-215ENST00000556210 TISP43B9A030 160 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 DAPK3O43293 454 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 HIP1RO75146 1068 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 ARP10275 920 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 MTERF2Q49AM1 385 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 CEP55Q53EZ4 464 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 PASD1Q8IV76 773 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 IQCDQ96DY2 449 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 GUCY1A3Q02108 690 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 IFT88Q13099 833 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 DGKZQ13574 1117 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 FAM84AQ96KN4 292 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 CEP63Q96MT8 703 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 MTMR9Q96QG7 549 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 EVI5O60447 810 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 MXI1P50539 228 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 FBXW10Q5XX13 1052 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 UBL4BQ8N7F7 174 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 RMDN3Q96TC7 470 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 NOVA2Q9UNW9 492 aaKnown RBP16.1■□□□□ 0.17
CUX1-215ENST00000556210 PLAAQ9Y263 795 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 ZNF263O14978 683 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 CD19P15391 556 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 WDR44Q5JSH3 913 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 SEPT14Q6ZU15 432 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 ZNF653Q96CK0 615 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 LRRC45Q96CN5 670 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 CABS1Q96KC9 395 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 ADAM33Q9BZ11 813 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 VIPAS39Q9H9C1 493 aa16.1■□□□□ 0.17
CUX1-215ENST00000556210 TYW1Q9NV66 732 aaKnown RBP16.1■□□□□ 0.17
CUX1-215ENST00000556210 BAZ2AQ9UIF9 1905 aaKnown RBP16.09■□□□□ 0.17
CUX1-215ENST00000556210 EMSYQ7Z589 1322 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 ESYT2A0FGR8 921 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 KRT19P08727 400 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 FERP16591 822 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 CETN2P41208 172 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 IRAK1P51617 712 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 STRIP1Q5VSL9 837 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 SYCE1Q8N0S2 351 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 SLC30A5Q8TAD4 765 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 FAM20AQ96MK3 541 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 MLXIPLQ9NP71 852 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 MTUS1Q9ULD2 1270 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 A6NNZ2 444 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 GALCP54803 685 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 SOX10P56693 466 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 TUBB8Q3ZCM7 444 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 HHIPL2Q6UWX4 724 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 OTUD6AQ7L8S5 288 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 PACS2Q86VP3 889 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 FAM118BQ9BPY3 351 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 TRIM51Q9BSJ1 452 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 HEMGNQ9BXL5 484 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 PLCB1Q9NQ66 1216 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 PRELPP51888 382 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 MTMR1Q13613 665 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 GIT2Q14161 759 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 MCTP2Q6DN12 878 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 WDR93Q6P2C0 686 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 TTLL6Q8N841 843 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 IFT74Q96LB3 600 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 OSGEPQ9NPF4 335 aa16.09■□□□□ 0.17
CUX1-215ENST00000556210 A0A1W2PRG0 241 aa16.08■□□□□ 0.17
CUX1-215ENST00000556210 TMOD1P28289 359 aa16.08■□□□□ 0.17
CUX1-215ENST00000556210 GLIS2Q9BZE0 524 aaPredicted RBP16.08■□□□□ 0.17
CUX1-215ENST00000556210 IMPG2Q9BZV3 1241 aa16.08■□□□□ 0.17
CUX1-215ENST00000556210 ACP6Q9NPH0 428 aa16.08■□□□□ 0.17
CUX1-215ENST00000556210 MTRF1LQ9UGC7 380 aaKnown RBP16.08■□□□□ 0.17
CUX1-215ENST00000556210 SART1O43290 800 aaKnown RBP16.08■□□□□ 0.16
CUX1-215ENST00000556210 RPA1P27694 616 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 ANKS1AQ92625 1134 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 ARL8AQ96BM9 186 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 JPH2Q9BR39 696 aaPredicted RBP16.08■□□□□ 0.16
CUX1-215ENST00000556210 WDR11Q9BZH6 1224 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 TTI1O43156 1089 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 RAD51CO43502 376 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 FTLP02792 175 aaPredicted RBP16.08■□□□□ 0.16
CUX1-215ENST00000556210 GLI1P08151 1106 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 LIG4P49917 911 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 TRADDQ15628 312 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 HP1BP3Q5SSJ5 553 aaPredicted RBP16.08■□□□□ 0.16
CUX1-215ENST00000556210 RINT1Q6NUQ1 792 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 GLG1Q92896 1179 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 KMT5AQ9NQR1 393 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 NYAP2Q9P242 653 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 TBK1Q9UHD2 729 aa16.08■□□□□ 0.16
CUX1-215ENST00000556210 ATF7P17544 494 aaPredicted RBP16.07■□□□□ 0.16
CUX1-215ENST00000556210 MARK3P27448 753 aa16.07■□□□□ 0.16
CUX1-215ENST00000556210 DMP1Q13316 513 aaPredicted RBP16.07■□□□□ 0.16
CUX1-215ENST00000556210 SLC27A3Q5K4L6 730 aa16.07■□□□□ 0.16
CUX1-215ENST00000556210 ZNF571Q7Z3V5 609 aaPredicted RBP16.07■□□□□ 0.16
CUX1-215ENST00000556210 ANKRD35Q8N283 1001 aa16.07■□□□□ 0.16
CUX1-215ENST00000556210 PURBQ96QR8 312 aaKnown RBP16.07■□□□□ 0.16
CUX1-215ENST00000556210 NOC2LQ9Y3T9 749 aaKnown RBP16.07■□□□□ 0.16
CUX1-215ENST00000556210 DAAM1Q9Y4D1 1078 aa16.07■□□□□ 0.16
CUX1-215ENST00000556210 CD58P19256 250 aa16.07■□□□□ 0.16
CUX1-215ENST00000556210 KCNMA1Q12791 1236 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms