RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 SYNE3Q6ZMZ3 975 aa16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 COLGALT1Q8NBJ5 622 aa16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 KCNB2Q92953 911 aa16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 TNPO1Q92973 898 aaKnown RBP16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ADAMTS10Q9H324 1103 aa16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 TYW1Q9NV66 732 aaKnown RBP16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PCDHB7Q9Y5E2 793 aa16.32■□□□□ 0.2
CHMP4BP1-201ENST00000556017 TBKBP1A7MCY6 615 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 IBSPP21815 317 aaPredicted RBP16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 MRE11P49959 708 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 CRYBB1P53674 252 aaPredicted RBP16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 UBE3AQ05086 875 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 NTRK3Q16288 839 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 DUSP6Q16828 381 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 FAM160B1Q5W0V3 765 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ZNF746Q6NUN9 644 aaPredicted RBP16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 BMP8AQ7Z5Y6 402 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 BBXQ8WY36 941 aaPredicted RBP16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 CASD1Q96PB1 797 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 S1PR5Q9H228 398 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 KCNH6Q9H252 994 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 C1orf112Q9NSG2 853 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 TMEM161AQ9NX61 479 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 LRFN2Q9ULH4 789 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 CACNA1HO95180 2353 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 MYO10Q9HD67 2058 aa16.31■□□□□ 0.2
CHMP4BP1-201ENST00000556017 CIITAP33076 1130 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ZNF76P36508 570 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 CLCN3P51790 818 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 APOBRQ0VD83 1088 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 IER5LQ5T953 404 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 RNF20Q5VTR2 975 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 MIS18BP1Q6P0N0 1132 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 TMEM184AQ6ZMB5 413 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 FAM43BQ6ZT52 329 aaPredicted RBP16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PRSS33Q8NF86 280 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 RASGRP4Q8TDF6 673 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PHOX2BQ99453 314 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ZNF577Q9BSK1 485 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 GLT8D2Q9H1C3 349 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ELAC1Q9H777 363 aaKnown RBP16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 TLE6Q9H808 572 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 TLR9Q9NR96 1032 aa16.3■□□□□ 0.2
CHMP4BP1-201ENST00000556017 DENND3A2RUS2 1198 aa16.29■□□□□ 0.2
CHMP4BP1-201ENST00000556017 GPR182O15218 404 aa16.29■□□□□ 0.2
CHMP4BP1-201ENST00000556017 SYCE2Q6PIF2 218 aa16.29■□□□□ 0.2
CHMP4BP1-201ENST00000556017 TRIM67Q6ZTA4 783 aa16.29■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PPP2R3CQ969Q6 453 aa16.29■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PHF7Q9BWX1 381 aaPredicted RBP16.29■□□□□ 0.2
CHMP4BP1-201ENST00000556017 AGXT2Q9BYV1 514 aa16.29■□□□□ 0.2
CHMP4BP1-201ENST00000556017 TBC1D22BQ9NU19 505 aa16.29■□□□□ 0.2
CHMP4BP1-201ENST00000556017 CDH22Q9UJ99 828 aa16.29■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PCDHB12Q9Y5F1 795 aa16.29■□□□□ 0.2
CHMP4BP1-201ENST00000556017 HIDE1A8MVS5 230 aa16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PRPF3O43395 683 aaKnown RBP16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ATF7P17544 494 aaPredicted RBP16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PBX3P40426 434 aa16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 NLRP11P59045 1033 aaKnown RBP16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ZXDAP98168 799 aa16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PLCB3Q01970 1234 aa16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 UGCGQ16739 394 aa16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 CLLU1OSQ5K130 101 aa16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 TRMT1LQ7Z2T5 733 aaKnown RBP16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 SMAP1Q8IYB5 467 aaPredicted RBP16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 REXO1Q8N1G1 1221 aaKnown RBP16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 FBXL16Q8N461 479 aa16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PHKBQ93100 1093 aa16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 CEP89Q96ST8 783 aa16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 GABBR1Q9UBS5 961 aa16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 LZTS1Q9Y250 596 aa16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PCDHA10Q9Y5I2 948 aa16.28■□□□□ 0.2
CHMP4BP1-201ENST00000556017 TMEM221A6NGB7 291 aa16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 M0R296 226 aa16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 STBD1O95210 358 aa16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 METAP2P50579 478 aaKnown RBP eCLIP16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 PRR16Q569H4 304 aa16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ZNF598Q86UK7 904 aaKnown RBP16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 LRRC71Q8N4P6 559 aa16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 METTL13Q8N6R0 699 aa16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 MRPS27Q92552 414 aaKnown RBP16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 GJA10Q969M2 543 aa16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ASIC4Q96FT7 647 aa16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ZNF668Q96K58 619 aaPredicted RBP16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 MFSD14AQ96MC6 490 aa16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 TMEM117Q9H0C3 514 aa16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 ATP6V0A4Q9HBG4 840 aa16.27■□□□□ 0.2
CHMP4BP1-201ENST00000556017 CFAP54Q96N23 3096 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 MSH4O15457 936 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 GPC3P51654 580 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 SETQ01105 290 aaPredicted RBP16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 DRP2Q13474 957 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 TARBP2Q15633 366 aaKnown RBP16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 PLPP4Q5VZY2 271 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 EFCAB12Q6NXP0 572 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 KCNT2Q6UVM3 1135 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 B3GNT9Q6UX72 402 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 Q6ZUG5 572 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 ECHDC2Q86YB7 292 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 THNSL1Q8IYQ7 743 aa16.26■□□□□ 0.19
CHMP4BP1-201ENST00000556017 MICAL1Q8TDZ2 1067 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms