RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 FRMPD3Q5JV73 1810 aa12.25□□□□□ -0.45
TMEM260-208ENST00000555905 NPHP3-ACAD11A0A0J9YXS1 232 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 MYADML2A6NDP7 307 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 BIN1O00499 593 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 ADAMTS4O75173 837 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 FAM13AO94988 1023 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 F2P00734 622 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 COL1A2P08123 1366 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 CCL5P13501 91 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 GAP43P17677 238 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 CST5P28325 142 aaPredicted RBP12.24□□□□□ -0.45
TMEM260-208ENST00000555905 MYH11P35749 1972 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 PSEN2P49810 448 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 POLGP54098 1239 aaPredicted RBP12.24□□□□□ -0.45
TMEM260-208ENST00000555905 CHMP4BP1P59074 171 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 ZNF445P59923 1031 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 PURAQ00577 322 aaKnown RBP12.24□□□□□ -0.45
TMEM260-208ENST00000555905 GIT2Q14161 759 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 KCNB1Q14721 858 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 MFSD10Q14728 455 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 KMT5BQ4FZB7 885 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 ZNF484Q5JVG2 852 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 ARRDC4Q8NCT1 418 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 MCPH1Q8NEM0 835 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 SLC7A3Q8WY07 619 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 KAT6AQ92794 2004 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 DNAJC19Q96DA6 116 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 DRC1Q96MC2 740 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 DCBLD2Q96PD2 775 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 JPH2Q9BR39 696 aaPredicted RBP12.24□□□□□ -0.45
TMEM260-208ENST00000555905 SH2D3AQ9BRG2 576 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 REEP2Q9BRK0 252 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 MTG1Q9BT17 334 aaPredicted RBP12.24□□□□□ -0.45
TMEM260-208ENST00000555905 UNC93B1Q9H1C4 597 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 RNPEPQ9H4A4 650 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 ZHX3Q9H4I2 956 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 ATP6V0A4Q9HBG4 840 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 PANK4Q9NVE7 773 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 MAN1B1Q9UKM7 699 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 ODF2LQ9ULJ1 636 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 COL4A3BPQ9Y5P4 624 aa12.24□□□□□ -0.45
TMEM260-208ENST00000555905 KLRC4O43908 158 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 HIP1RO75146 1068 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 INSRRP14616 1297 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 NLRP12P59046 1061 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 IRX5P78411 483 aaPredicted RBP12.23□□□□□ -0.45
TMEM260-208ENST00000555905 TYRO3Q06418 890 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 TBC1D8BQ0IIM8 1120 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 PPFIA1Q13136 1202 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 EMC2Q15006 297 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 TARBP2Q15633 366 aaKnown RBP12.23□□□□□ -0.45
TMEM260-208ENST00000555905 KCNA10Q16322 511 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 STX1AQ16623 288 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 KIAA0753Q2KHM9 967 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 FAM102BQ5T8I3 360 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 LHX8Q68G74 356 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 ISM2Q6H9L7 571 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 LRSAM1Q6UWE0 723 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 KLHDC9Q8NEP7 349 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 KAT2BQ92831 832 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 RNF208Q9H0X6 261 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 ANO10Q9NW15 660 aa12.23□□□□□ -0.45
TMEM260-208ENST00000555905 HTTP42858 3142 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 FRMD3A2A2Y4 597 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 RRN3P2A6NIE6 340 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 ZBTB42B2RXF5 422 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 MAGEB2O15479 319 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 GAS2O43903 313 aaKnown RBP12.22□□□□□ -0.45
TMEM260-208ENST00000555905 MAFO75444 373 aaPredicted RBP12.22□□□□□ -0.45
TMEM260-208ENST00000555905 CABYRO75952 493 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 RHOBTB3O94955 611 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 MYCP01106 439 aaPredicted RBP12.22□□□□□ -0.45
TMEM260-208ENST00000555905 ASGR1P07306 291 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 IGBP1P78318 339 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 COASYQ13057 564 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 PSMD2Q13200 908 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 MORC3Q14149 939 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 LRRC41Q15345 812 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 HERC4Q5GLZ8 1057 aaPredicted RBP12.22□□□□□ -0.45
TMEM260-208ENST00000555905 ZNF658Q5TYW1 1059 aaPredicted RBP12.22□□□□□ -0.45
TMEM260-208ENST00000555905 CXCL17Q6UXB2 119 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 MAEAQ7L5Y9 396 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 MYCT1Q8N699 235 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 C7orf31Q8N865 590 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 RETREG2Q8NC44 543 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 TCP11Q8WWU5 503 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 KIFAP3Q92845 792 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 TSEN34Q9BSV6 310 aaKnown RBP12.22□□□□□ -0.45
TMEM260-208ENST00000555905 TSPY26PQ9H489 355 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 DHX33Q9H6R0 707 aaKnown RBP12.22□□□□□ -0.45
TMEM260-208ENST00000555905 PARVGQ9HBI0 331 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 PAK6Q9NQU5 681 aaPredicted RBP12.22□□□□□ -0.45
TMEM260-208ENST00000555905 SEL1LQ9UBV2 794 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 DACH1Q9UI36 760 aa12.22□□□□□ -0.45
TMEM260-208ENST00000555905 NRCAMQ92823 1304 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 MOXD2PA6NHM9 499 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 RSPH10B2B2RC85 870 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 KBTBD13C9JR72 458 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 HAS3O00219 553 aa12.21□□□□□ -0.45
TMEM260-208ENST00000555905 RSPH10BP0C881 870 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms