RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 A0A087X0B3 334 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 A0A1B0GVL5 298 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 H3BQ06 376 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 CHMP2AO43633 222 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 MBD3O95983 291 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 CYP2C9P11712 490 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 SMPD1P17405 629 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 LIG1P18858 919 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 NDUFA8P51970 172 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 JAK3P52333 1124 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 ERVK-21P61565 698 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 PSMC6P62333 389 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 FAM160A1Q05DH4 1040 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 ARHGAP1Q07960 439 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 DUSP28Q4G0W2 176 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 CELF3Q5SZQ8 465 aaKnown RBP13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 CYFIP1Q7L576 1253 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 ADHFE1Q8IWW8 467 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 ENGASEQ8NFI3 743 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 RDM1Q8NG50 284 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 SNX29Q8TEQ0 813 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 COPS5Q92905 334 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 EMID1Q96A84 441 aaPredicted RBP13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 FAM86C1Q9NVL1 165 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 SLC9A2Q9UBY0 812 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 GNEQ9Y223 722 aaKnown RBP13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 SIP14410 1827 aa13.13□□□□□ -0.31
MTHFD1-211ENST00000555709 WDR64B1ANS9 1081 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 SLC26A4O43511 780 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 PTGS1P23219 599 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 SFNP31947 248 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 RFC2P35250 354 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 UBA7P41226 1012 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 ACTR2P61160 394 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 SNW1Q13573 536 aaKnown RBP13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 KARSQ15046 597 aaKnown RBP13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 E2F4Q16254 413 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 TPRNQ4KMQ1 711 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 TMEM119Q4V9L6 283 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 HYIQ5T013 277 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 HAUS3Q68CZ6 603 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 IQSEC1Q6DN90 963 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 CCDC73Q6ZRK6 1079 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 CABP7Q86V35 215 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 SMAP1Q8IYB5 467 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 FMR1NBQ8N0W7 255 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 ERMNQ8TAM6 284 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 PNMA5Q96PV4 448 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 HSD17B14Q9BPX1 270 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 DISC1Q9NRI5 854 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 TRMT13Q9NUP7 481 aaKnown RBP13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 FAM13BQ9NYF5 915 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 TCEAL9Q9UHQ7 104 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 MUTYHQ9UIF7 546 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 KCNH3Q9ULD8 1083 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 TANC1Q9C0D5 1861 aa13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 KMT2BQ9UMN6 2715 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-211ENST00000555709 LOXHD1Q8IVV2 1947 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 MYH9P35579 1960 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 NKRFO15226 690 aaKnown RBP eCLIP13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 SORBS3O60504 671 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 MED24O75448 989 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 NR1I2O75469 434 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 ATG7O95352 703 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 GH1P01241 217 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 SPATA31C1P0DKV0 1188 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 RPA1P27694 616 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 TXLNAP40222 546 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 TNFAIP2Q03169 654 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 COL19A1Q14993 1142 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 EPHA7Q15375 998 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 FSCN1Q16658 493 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 KRT79Q5XKE5 535 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 MIER3Q7Z3K6 550 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 TMCO2Q7Z6W1 182 aaPredicted RBP13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 LRRC15Q8TF66 581 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 EDAQ92838 391 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 EIF2AK1Q9BQI3 630 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 POLR3CQ9BUI4 534 aaPredicted RBP13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 MTUS1Q9ULD2 1270 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 STK24Q9Y6E0 443 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 CACNA1GO43497 2377 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 GVINP1Q7Z2Y8 2422 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 IGSF9BQ9UPX0 1349 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 KDM3AQ9Y4C1 1321 aa13.11□□□□□ -0.31
MTHFD1-211ENST00000555709 IGKV6D-21A0A0A0MT36 114 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 GSTTP1A0A1W2PQM5 241 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 BAIAP3O94812 1187 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 SUPT20HL2P0C7V6 817 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 HOXD8P13378 290 aaPredicted RBP13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 PLCG1P19174 1290 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 CCT6AP40227 531 aaKnown RBP13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 SYKP43405 635 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 SP4Q02446 784 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 CYP4A11Q02928 519 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 LAMC2Q13753 1193 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 ECM1Q16610 540 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 KLHL40Q2TBA0 621 aa13.1□□□□□ -0.31
MTHFD1-211ENST00000555709 HSDL1Q3SXM5 330 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms