RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 PRRX2Q99811 253 aa5.86□□□□□ -1.47
SCFD1-216ENST00000555550 TRBV23-1A0A0A0MS06 115 aa5.85□□□□□ -1.47
SCFD1-216ENST00000555550 SCNN1GP51170 649 aa5.85□□□□□ -1.47
SCFD1-216ENST00000555550 RIN1Q13671 783 aa5.85□□□□□ -1.47
SCFD1-216ENST00000555550 SAFB2Q14151 953 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCFD1-216ENST00000555550 Q6ZRM9 215 aa5.85□□□□□ -1.47
SCFD1-216ENST00000555550 MTDHQ86UE4 582 aaKnown RBP5.85□□□□□ -1.47
SCFD1-216ENST00000555550 SCUBE1Q8IWY4 988 aa5.85□□□□□ -1.47
SCFD1-216ENST00000555550 DEPDC7Q96QD5 511 aa5.85□□□□□ -1.47
SCFD1-216ENST00000555550 SRPK1Q96SB4 655 aaKnown RBP5.85□□□□□ -1.47
SCFD1-216ENST00000555550 OR10A5Q9H207 317 aa5.85□□□□□ -1.47
SCFD1-216ENST00000555550 MSL2Q9HCI7 577 aa5.85□□□□□ -1.47
SCFD1-216ENST00000555550 GPRC5BQ9NZH0 403 aa5.85□□□□□ -1.47
SCFD1-216ENST00000555550 DIAPH1O60610 1272 aaKnown RBP5.84□□□□□ -1.47
SCFD1-216ENST00000555550 MMEP08473 750 aa5.84□□□□□ -1.47
SCFD1-216ENST00000555550 SUMO1P63165 101 aaKnown RBP5.84□□□□□ -1.47
SCFD1-216ENST00000555550 ST5P78524 1137 aa5.84□□□□□ -1.47
SCFD1-216ENST00000555550 ADAM15Q13444 863 aa5.84□□□□□ -1.47
SCFD1-216ENST00000555550 FIGNQ5HY92 759 aa5.84□□□□□ -1.47
SCFD1-216ENST00000555550 SOGA3Q5TF21 947 aa5.84□□□□□ -1.47
SCFD1-216ENST00000555550 TMEM200BQ69YZ2 307 aa5.84□□□□□ -1.47
SCFD1-216ENST00000555550 C16orf59Q7L2K0 433 aa5.84□□□□□ -1.47
SCFD1-216ENST00000555550 ZBTB38Q8NAP3 1195 aaPredicted RBP5.84□□□□□ -1.47
SCFD1-216ENST00000555550 GPR150Q8NGU9 434 aa5.84□□□□□ -1.47
SCFD1-216ENST00000555550 AQP7O14520 342 aa5.83□□□□□ -1.48
SCFD1-216ENST00000555550 WNT9AO14904 365 aa5.83□□□□□ -1.48
SCFD1-216ENST00000555550 CYP27B1O15528 508 aa5.83□□□□□ -1.48
SCFD1-216ENST00000555550 LMO1P25800 156 aa5.83□□□□□ -1.48
SCFD1-216ENST00000555550 HERVK_113P62684 666 aa5.83□□□□□ -1.48
SCFD1-216ENST00000555550 ATP2C1P98194 919 aaPredicted RBP5.83□□□□□ -1.48
SCFD1-216ENST00000555550 GUCY1A3Q02108 690 aa5.83□□□□□ -1.48
SCFD1-216ENST00000555550 RBL2Q08999 1139 aa5.83□□□□□ -1.48
SCFD1-216ENST00000555550 CRY1Q16526 586 aa5.83□□□□□ -1.48
SCFD1-216ENST00000555550 FAM209AQ5JX71 171 aa5.83□□□□□ -1.48
SCFD1-216ENST00000555550 GRAMD4Q6IC98 578 aa5.83□□□□□ -1.48
SCFD1-216ENST00000555550 SNTG2Q9NY99 539 aa5.83□□□□□ -1.48
SCFD1-216ENST00000555550 A0A1W2PRX2 142 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 PRAMEF22A3QJZ6 481 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 ADCY3O60266 1144 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 APPP05067 770 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 FAM153BP0C7A2 387 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 IL12RB1P42701 662 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 DNM2P50570 870 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 SERINC3Q13530 473 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 RASA3Q14644 834 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 FOXB2Q5VYV0 432 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 MAMDC2Q7Z304 686 aaPredicted RBP5.82□□□□□ -1.48
SCFD1-216ENST00000555550 VOPP1Q96AW1 172 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 DNAJC2Q99543 621 aaKnown RBP5.82□□□□□ -1.48
SCFD1-216ENST00000555550 MPHOSPH9Q99550 1183 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 NRDE2Q9H7Z3 1164 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 SMURF1Q9HCE7 757 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 PCDHA9Q9Y5H5 950 aa5.82□□□□□ -1.48
SCFD1-216ENST00000555550 FAM221BA6H8Z2 402 aa5.81□□□□□ -1.48
SCFD1-216ENST00000555550 ZNF561-AS1K7EIQ3 104 aa5.81□□□□□ -1.48
SCFD1-216ENST00000555550 CLASP2O75122 1294 aaKnown RBP5.81□□□□□ -1.48
SCFD1-216ENST00000555550 PEX11BO96011 259 aa5.81□□□□□ -1.48
SCFD1-216ENST00000555550 CNGB1Q14028 1251 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-216ENST00000555550 LRP10Q7Z4F1 713 aa5.81□□□□□ -1.48
SCFD1-216ENST00000555550 ANKRD35Q8N283 1001 aa5.81□□□□□ -1.48
SCFD1-216ENST00000555550 PTPRN2Q92932 1015 aa5.81□□□□□ -1.48
SCFD1-216ENST00000555550 DNAJC7Q99615 494 aa5.81□□□□□ -1.48
SCFD1-216ENST00000555550 DHRS4Q9BTZ2 278 aa5.81□□□□□ -1.48
SCFD1-216ENST00000555550 MAGEL2Q9UJ55 1249 aa5.81□□□□□ -1.48
SCFD1-216ENST00000555550 CCDC66A2RUB6 948 aa5.8□□□□□ -1.48
SCFD1-216ENST00000555550 PMS2P1A4D2B8 440 aa5.8□□□□□ -1.48
SCFD1-216ENST00000555550 TMEM191CA6NGB0 347 aa5.8□□□□□ -1.48
SCFD1-216ENST00000555550 SCDO00767 359 aa5.8□□□□□ -1.48
SCFD1-216ENST00000555550 FAM20BO75063 409 aa5.8□□□□□ -1.48
SCFD1-216ENST00000555550 TM4SF20Q53R12 229 aa5.8□□□□□ -1.48
SCFD1-216ENST00000555550 VRK3Q8IV63 474 aa5.8□□□□□ -1.48
SCFD1-216ENST00000555550 GSPT2Q8IYD1 628 aaKnown RBP5.8□□□□□ -1.48
SCFD1-216ENST00000555550 BCL6BQ8N143 479 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-216ENST00000555550 HIPK4Q8NE63 616 aa5.8□□□□□ -1.48
SCFD1-216ENST00000555550 SREK1Q8WXA9 508 aaKnown RBP5.8□□□□□ -1.48
SCFD1-216ENST00000555550 ASB15Q8WXK1 588 aa5.8□□□□□ -1.48
SCFD1-216ENST00000555550 RABGGTAQ92696 567 aa5.8□□□□□ -1.48
SCFD1-216ENST00000555550 EXOC2Q96KP1 924 aa5.8□□□□□ -1.48
SCFD1-216ENST00000555550 RPL10LQ96L21 214 aaKnown RBP5.8□□□□□ -1.48
SCFD1-216ENST00000555550 GBP4Q96PP9 640 aa5.8□□□□□ -1.48
SCFD1-216ENST00000555550 ARVCFO00192 962 aa5.79□□□□□ -1.48
SCFD1-216ENST00000555550 NAT1P18440 290 aa5.79□□□□□ -1.48
SCFD1-216ENST00000555550 ADCY7P51828 1080 aa5.79□□□□□ -1.48
SCFD1-216ENST00000555550 GABREP78334 506 aa5.79□□□□□ -1.48
SCFD1-216ENST00000555550 TOB2Q14106 344 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-216ENST00000555550 LONRF2Q1L5Z9 754 aa5.79□□□□□ -1.48
SCFD1-216ENST00000555550 MBNL2Q5VZF2 373 aaKnown RBP5.79□□□□□ -1.48
SCFD1-216ENST00000555550 FSTL4Q6MZW2 842 aa5.79□□□□□ -1.48
SCFD1-216ENST00000555550 MRGPREQ86SM8 312 aa5.79□□□□□ -1.48
SCFD1-216ENST00000555550 MKL1Q969V6 931 aa5.79□□□□□ -1.48
SCFD1-216ENST00000555550 MIEF2Q96C03 454 aa5.79□□□□□ -1.48
SCFD1-216ENST00000555550 NDOR1Q9UHB4 597 aa5.79□□□□□ -1.48
SCFD1-216ENST00000555550 MRPS23Q9Y3D9 190 aaKnown RBP5.79□□□□□ -1.48
SCFD1-216ENST00000555550 CTDP1Q9Y5B0 961 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-216ENST00000555550 XDHP47989 1333 aa5.78□□□□□ -1.48
SCFD1-216ENST00000555550 RASSF10A6NK89 507 aa5.78□□□□□ -1.48
SCFD1-216ENST00000555550 GSTA4O15217 222 aa5.78□□□□□ -1.48
SCFD1-216ENST00000555550 GCP02774 474 aa5.78□□□□□ -1.48
SCFD1-216ENST00000555550 PROZP22891 400 aa5.78□□□□□ -1.48
SCFD1-216ENST00000555550 ZC3H12BQ5HYM0 836 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms