RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 GCFC2P16383 781 aaKnown RBP27.52■■■□□ 2
PRKCH-216ENST00000555542 ADAMTS19Q8TE59 1207 aa27.52■■■□□ 2
PRKCH-216ENST00000555542 SCLT1Q96NL6 688 aa27.52■■■□□ 2
PRKCH-216ENST00000555542 TMX1Q9H3N1 280 aa27.52■■■□□ 2
PRKCH-216ENST00000555542 ST3GAL5Q9UNP4 418 aa27.52■■■□□ 2
PRKCH-216ENST00000555542 TRANK1O15050 2925 aa27.51■■■□□ 2
PRKCH-216ENST00000555542 FOSBP53539 338 aa27.51■■□□□ 1.99
PRKCH-216ENST00000555542 TRIM29Q14134 588 aa27.51■■□□□ 1.99
PRKCH-216ENST00000555542 MTERF2Q49AM1 385 aa27.51■■□□□ 1.99
PRKCH-216ENST00000555542 MRPL38Q96DV4 380 aaKnown RBP27.51■■□□□ 1.99
PRKCH-216ENST00000555542 FDPSP14324 419 aaKnown RBP27.5■■□□□ 1.99
PRKCH-216ENST00000555542 NLRP11P59045 1033 aaKnown RBP27.5■■□□□ 1.99
PRKCH-216ENST00000555542 PAN2Q504Q3 1202 aaKnown RBP27.5■■□□□ 1.99
PRKCH-216ENST00000555542 XKR3Q5GH77 459 aa27.5■■□□□ 1.99
PRKCH-216ENST00000555542 PPP4R3AQ6IN85 833 aa27.5■■□□□ 1.99
PRKCH-216ENST00000555542 BANK1Q8NDB2 785 aa27.5■■□□□ 1.99
PRKCH-216ENST00000555542 ZNF689Q96CS4 500 aaPredicted RBP27.5■■□□□ 1.99
PRKCH-216ENST00000555542 FAM20AQ96MK3 541 aa27.5■■□□□ 1.99
PRKCH-216ENST00000555542 ADAM2Q99965 735 aa27.5■■□□□ 1.99
PRKCH-216ENST00000555542 C11orf84Q9BUA3 381 aaPredicted RBP27.5■■□□□ 1.99
PRKCH-216ENST00000555542 RC3H2Q9HBD1 1191 aaKnown RBP27.5■■□□□ 1.99
PRKCH-216ENST00000555542 RNF216Q9NWF9 866 aaPredicted RBP27.5■■□□□ 1.99
PRKCH-216ENST00000555542 PCDHB7Q9Y5E2 793 aa27.5■■□□□ 1.99
PRKCH-216ENST00000555542 VCANP13611 3396 aa27.5■■□□□ 1.99
PRKCH-216ENST00000555542 GPR32O75388 356 aa27.49■■□□□ 1.99
PRKCH-216ENST00000555542 BMPR1AP36894 532 aa27.49■■□□□ 1.99
PRKCH-216ENST00000555542 SARSP49591 514 aaKnown RBP27.49■■□□□ 1.99
PRKCH-216ENST00000555542 KCNQ1P51787 676 aa27.49■■□□□ 1.99
PRKCH-216ENST00000555542 TIGD5Q53EQ6 642 aa27.49■■□□□ 1.99
PRKCH-216ENST00000555542 FAM43BQ6ZT52 329 aaPredicted RBP27.49■■□□□ 1.99
PRKCH-216ENST00000555542 NSUN7Q8NE18 718 aaKnown RBP27.49■■□□□ 1.99
PRKCH-216ENST00000555542 C1orf112Q9NSG2 853 aa27.49■■□□□ 1.99
PRKCH-216ENST00000555542 RB1P06400 928 aa27.48■■□□□ 1.99
PRKCH-216ENST00000555542 NR5A1Q13285 461 aa27.48■■□□□ 1.99
PRKCH-216ENST00000555542 B3GNT9Q6UX72 402 aa27.48■■□□□ 1.99
PRKCH-216ENST00000555542 FAM228AQ86W67 206 aa27.48■■□□□ 1.99
PRKCH-216ENST00000555542 CMTR2Q8IYT2 770 aaKnown RBP27.48■■□□□ 1.99
PRKCH-216ENST00000555542 ZNF668Q96K58 619 aaPredicted RBP27.48■■□□□ 1.99
PRKCH-216ENST00000555542 UHRF1Q96T88 793 aaPredicted RBP27.48■■□□□ 1.99
PRKCH-216ENST00000555542 DDX11L8A8MPP1 907 aa27.47■■□□□ 1.99
PRKCH-216ENST00000555542 MGEA5O60502 916 aa27.47■■□□□ 1.99
PRKCH-216ENST00000555542 JAK2O60674 1132 aa27.47■■□□□ 1.99
PRKCH-216ENST00000555542 PSMC5P62195 406 aa27.47■■□□□ 1.99
PRKCH-216ENST00000555542 PPP2R5CQ13362 524 aa27.47■■□□□ 1.99
PRKCH-216ENST00000555542 ZNF710Q8N1W2 664 aa27.47■■□□□ 1.99
PRKCH-216ENST00000555542 KCNMB3Q9NPA1 279 aa27.47■■□□□ 1.99
PRKCH-216ENST00000555542 CUL9Q8IWT3 2517 aa27.46■■□□□ 1.99
PRKCH-216ENST00000555542 TCF20Q9UGU0 1960 aaKnown RBP27.46■■□□□ 1.99
PRKCH-216ENST00000555542 TMEM150BA6NC51 233 aa27.46■■□□□ 1.99
PRKCH-216ENST00000555542 TNFRSF10AO00220 468 aa27.46■■□□□ 1.99
PRKCH-216ENST00000555542 BAG4O95429 457 aaKnown RBP27.46■■□□□ 1.99
PRKCH-216ENST00000555542 EARS2Q5JPH6 523 aaKnown RBP27.46■■□□□ 1.99
PRKCH-216ENST00000555542 SLC24A5Q71RS6 500 aa27.46■■□□□ 1.99
PRKCH-216ENST00000555542 POTEDQ86YR6 584 aa27.46■■□□□ 1.99
PRKCH-216ENST00000555542 LINC01465Q8N7H1 131 aa27.46■■□□□ 1.99
PRKCH-216ENST00000555542 NLRP7Q8WX94 980 aa27.46■■□□□ 1.99
PRKCH-216ENST00000555542 CLP1Q92989 425 aaKnown RBP27.46■■□□□ 1.99
PRKCH-216ENST00000555542 SH2D3AQ9BRG2 576 aa27.46■■□□□ 1.99
PRKCH-216ENST00000555542 NIFKQ9BYG3 293 aaKnown RBP27.46■■□□□ 1.99
PRKCH-216ENST00000555542 RGS18Q9NS28 235 aa27.46■■□□□ 1.99
PRKCH-216ENST00000555542 MRPL42Q9Y6G3 142 aaKnown RBP27.46■■□□□ 1.99
PRKCH-216ENST00000555542 REV3LO60673 3130 aa27.45■■□□□ 1.98
PRKCH-216ENST00000555542 FAM205CA6NFA0 338 aa27.45■■□□□ 1.98
PRKCH-216ENST00000555542 C5orf67F2Z3F1 127 aa27.45■■□□□ 1.98
PRKCH-216ENST00000555542 EML1O00423 815 aa27.45■■□□□ 1.98
PRKCH-216ENST00000555542 TBX3O15119 743 aa27.45■■□□□ 1.98
PRKCH-216ENST00000555542 DKC1O60832 514 aaKnown RBP eCLIP27.45■■□□□ 1.98
PRKCH-216ENST00000555542 CSPG5O95196 566 aa27.45■■□□□ 1.98
PRKCH-216ENST00000555542 GATMP50440 423 aa27.45■■□□□ 1.98
PRKCH-216ENST00000555542 DNM2P50570 870 aa27.45■■□□□ 1.98
PRKCH-216ENST00000555542 VAV3Q9UKW4 847 aa27.45■■□□□ 1.98
PRKCH-216ENST00000555542 LIMCH1Q9UPQ0 1083 aa27.45■■□□□ 1.98
PRKCH-216ENST00000555542 MMP1P03956 469 aa27.44■■□□□ 1.98
PRKCH-216ENST00000555542 ZSCAN20P17040 1043 aaPredicted RBP27.44■■□□□ 1.98
PRKCH-216ENST00000555542 EIF4BP23588 611 aaKnown RBP27.44■■□□□ 1.98
PRKCH-216ENST00000555542 QARSP47897 775 aaKnown RBP27.44■■□□□ 1.98
PRKCH-216ENST00000555542 GPC3P51654 580 aa27.44■■□□□ 1.98
PRKCH-216ENST00000555542 TARBP2Q15633 366 aaKnown RBP27.44■■□□□ 1.98
PRKCH-216ENST00000555542 SPOUT1Q5T280 376 aaKnown RBP27.44■■□□□ 1.98
PRKCH-216ENST00000555542 NCAPH2Q6IBW4 605 aa27.44■■□□□ 1.98
PRKCH-216ENST00000555542 SLFN12Q8IYM2 578 aa27.44■■□□□ 1.98
PRKCH-216ENST00000555542 CRIPAKQ8N1N5 446 aa27.44■■□□□ 1.98
PRKCH-216ENST00000555542 PLVAPQ9BX97 442 aa27.44■■□□□ 1.98
PRKCH-216ENST00000555542 ADAMTS10Q9H324 1103 aa27.44■■□□□ 1.98
PRKCH-216ENST00000555542 UBE2ZQ9H832 354 aaPredicted RBP27.44■■□□□ 1.98
PRKCH-216ENST00000555542 LINC00271P0C7V0 271 aa27.43■■□□□ 1.98
PRKCH-216ENST00000555542 BMP1P13497 986 aa27.43■■□□□ 1.98
PRKCH-216ENST00000555542 EP400NLQ6ZTU2 488 aa27.43■■□□□ 1.98
PRKCH-216ENST00000555542 DIS3L2Q8IYB7 885 aaKnown RBP27.43■■□□□ 1.98
PRKCH-216ENST00000555542 LMAN2LQ9H0V9 348 aa27.43■■□□□ 1.98
PRKCH-216ENST00000555542 NSUN3Q9H649 340 aaKnown RBP27.43■■□□□ 1.98
PRKCH-216ENST00000555542 KIAA1671Q9BY89 1806 aa27.43■■□□□ 1.98
PRKCH-216ENST00000555542 TBKBP1A7MCY6 615 aa27.42■■□□□ 1.98
PRKCH-216ENST00000555542 BTBD18B2RXH4 712 aa27.42■■□□□ 1.98
PRKCH-216ENST00000555542 C9IYK1 514 aa27.42■■□□□ 1.98
PRKCH-216ENST00000555542 GRM6O15303 877 aa27.42■■□□□ 1.98
PRKCH-216ENST00000555542 P4HBP07237 508 aaKnown RBP27.42■■□□□ 1.98
PRKCH-216ENST00000555542 TCEAL5Q5H9L2 206 aa27.42■■□□□ 1.98
PRKCH-216ENST00000555542 PLA2G4FQ68DD2 849 aa27.42■■□□□ 1.98
PRKCH-216ENST00000555542 CCDC83Q8IWF9 413 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms