RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 FAM83BQ5T0W9 1011 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 LRCH2Q5VUJ6 765 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 ANKRD13CQ8N6S4 541 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 LMBR1Q8WVP7 490 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 SCLT1Q96NL6 688 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 XPO6Q96QU8 1125 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 NUDT12Q9BQG2 462 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 NOD2Q9HC29 1040 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 PI4KBQ9UBF8 816 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 SLC12A4Q9UP95 1085 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 DIS3Q9Y2L1 958 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 COL4A3BPQ9Y5P4 624 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 A0A0A6YYK5 440 aaPredicted RBP11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 GOLGA6L10A0A0M3HER8 536 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 FTCDO95954 541 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 GBP2P32456 591 aaPredicted RBP11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 DOK7Q18PE1 504 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 KIAA0753Q2KHM9 967 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 SLFN13Q68D06 897 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 PPP4R3CPQ6ZMV5 832 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 KCTD1Q719H9 257 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 TMC3Q7Z5M5 1100 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 FLAD1Q8NFF5 587 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 MASTLQ96GX5 879 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 ANKRD27Q96NW4 1050 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 IDI2Q9BXS1 227 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 KCNMB3Q9NPA1 279 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 FBXL5Q9UKA1 691 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 INTUQ9ULD6 942 aa11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 TTC7AQ9ULT0 858 aaPredicted RBP11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 NOVA2Q9UNW9 492 aaKnown RBP11.63□□□□□ -0.55
MTHFD1-210ENST00000555252 PITPNM2Q9BZ72 1349 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 ANKRD31Q8N7Z5 1873 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 F8VZ95 297 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 LIN7AO14910 233 aaPredicted RBP11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 SART1O43290 800 aaKnown RBP11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 TLR2O60603 784 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 PPFIA2O75334 1257 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 NOL4O94818 638 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 FOSP01100 380 aaPredicted RBP11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 NUDT17P0C025 328 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 PLA2G4BP0C869 781 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 SLC16A2P36021 539 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 SCNN1DP51172 638 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 NPEPPSP55786 919 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 QRICH1Q2TAL8 776 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 CERKLQ49MI3 558 aaPredicted RBP11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 KRT27Q7Z3Y8 459 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 KCNK18Q7Z418 384 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 CLEC10AQ8IUN9 316 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 KLHL7Q8IXQ5 586 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 SYCE1Q8N0S2 351 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 KCTD17Q8N5Z5 321 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 ERMNQ8TAM6 284 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 UBLCP1Q8WVY7 318 aaPredicted RBP11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 PGM2Q96G03 612 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 ANO3Q9BYT9 981 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 NSRP1Q9H0G5 558 aaKnown RBP11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 PCDHA1Q9Y5I3 950 aa11.62□□□□□ -0.55
MTHFD1-210ENST00000555252 KCNK3O14649 394 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 ALADP13716 330 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 ICA1Q05084 483 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 ASIC2Q16515 512 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 STRIP1Q5VSL9 837 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 TMEM179Q6ZVK1 233 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 PIGWQ7Z7B1 504 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 CCDC63Q8NA47 563 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 TBC1D5Q92609 795 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 EEF2KMTQ96G04 330 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 ZNF317Q96PQ6 595 aaPredicted RBP11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 RAB17Q9H0T7 212 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 CNOT8Q9UFF9 292 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 SYNPO2Q9UMS6 1093 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 BRWD3Q6RI45 1802 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 TRAF5O00463 557 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 ZBTB48P10074 688 aaPredicted RBP11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 EEF2P13639 858 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 TMOD1P28289 359 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 GBP1P32455 592 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 MAGOHP61326 146 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 KLHL30Q0D2K2 578 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 TRAF1Q13077 416 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 ZNF268Q14587 947 aaPredicted RBP11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 ECM1Q16610 540 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 SPRED3Q2MJR0 410 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 EDRF1Q3B7T1 1238 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 C11orf91Q3C1V1 193 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 KRT71Q3SY84 523 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 Q4G0T1 1027 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 TATDN1Q6P1N9 297 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 SLFN11Q7Z7L1 901 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 ZC3H3Q8IXZ2 948 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 GBP7Q8N8V2 638 aaPredicted RBP11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 LRRC57Q8N9N7 239 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 GMCL1P1Q8NEA9 526 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 MAGOHBQ96A72 148 aaKnown RBP11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 GMCL1Q96IK5 515 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 AMNQ9BXJ7 453 aa11.61□□□□□ -0.55
MTHFD1-210ENST00000555252 TXLNGYQ9BZA5 131 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms