RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 GSTTP1A0A1W2PQM5 241 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 CALUO43852 315 aaPredicted RBP9.81□□□□□ -0.84
TDP1-210ENST00000554976 FAM13AO94988 1023 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 ARIH2O95376 493 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 GCNT3O95395 438 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 NR3C1P04150 777 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 ADAM9Q13443 819 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 MAMDC4Q6UXC1 1216 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 PPFIBP1Q86W92 1011 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 KSR1Q8IVT5 923 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 ANKRD35Q8N283 1001 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 MYCT1Q8N699 235 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 CCDC155Q8N6L0 562 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 GTF3C2Q8WUA4 911 aaPredicted RBP9.81□□□□□ -0.84
TDP1-210ENST00000554976 ATRIPQ8WXE1 791 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 BSNDQ8WZ55 320 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 NTPCRQ9BSD7 190 aaKnown RBP9.81□□□□□ -0.84
TDP1-210ENST00000554976 KATNBL1Q9H079 304 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 GANQ9H2C0 597 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 ADGRG1Q9Y653 693 aa9.81□□□□□ -0.84
TDP1-210ENST00000554976 PSAPP07602 524 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 NR2F2P24468 414 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 BRD2P25440 801 aaKnown RBP9.8□□□□□ -0.84
TDP1-210ENST00000554976 CASP4P49662 377 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 RTP1P59025 263 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 TBC1D8BQ0IIM8 1120 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 GNPTABQ3T906 1256 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 CST9Q5W186 159 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 CCDC62Q6P9F0 684 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 C16orf45Q96MC5 204 aaPredicted RBP9.8□□□□□ -0.84
TDP1-210ENST00000554976 PORCNQ9H237 461 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 MROH8Q9H579 483 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 GABBR1Q9UBS5 961 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 SRCAPQ6ZRS2 3230 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 BTBD19C9JJ37 291 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 ITGBL1O95965 494 aaPredicted RBP9.8□□□□□ -0.84
TDP1-210ENST00000554976 ZBED6P86452 979 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 MYBPC2Q14324 1141 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 TARBP2Q15633 366 aaKnown RBP9.8□□□□□ -0.84
TDP1-210ENST00000554976 ZNF792Q3KQV3 632 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 NCAPG2Q86XI2 1143 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 PRIMPOLQ96LW4 560 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 PTPN18Q99952 460 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 NIFKQ9BYG3 293 aaKnown RBP9.8□□□□□ -0.84
TDP1-210ENST00000554976 SIX2Q9NPC8 291 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 AGPAT3Q9NRZ7 376 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 TRMT1Q9NXH9 659 aaKnown RBP9.8□□□□□ -0.84
TDP1-210ENST00000554976 FAM184BQ9ULE4 1060 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 LGR5O75473 907 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 LCA5LO95447 670 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 CYP2C8P10632 490 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 ARHGAP25P42331 645 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 NPEPPSP55786 919 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 ALCAMQ13740 583 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 TTLL12Q14166 644 aaPredicted RBP9.8□□□□□ -0.84
TDP1-210ENST00000554976 ZNF662Q6ZS27 426 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 SLC35C1Q96A29 364 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 CHP1Q99653 195 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 PAGR1Q9BTK6 254 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 MKNK1Q9BUB5 465 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 RRAGCQ9HB90 399 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 GPRC5CQ9NQ84 441 aa9.8□□□□□ -0.84
TDP1-210ENST00000554976 RBM47A0AV96 593 aaKnown RBP9.79□□□□□ -0.84
TDP1-210ENST00000554976 POTEB2H3BUK9 544 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 PGK2P07205 417 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 ZBTB48P10074 688 aaPredicted RBP9.79□□□□□ -0.84
TDP1-210ENST00000554976 TGFB3P10600 412 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 TNNT1P13805 278 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 KRT9P35527 623 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 GTF2A2P52657 109 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 PRKCEQ02156 737 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 ASTE1Q2TB18 679 aaPredicted RBP9.79□□□□□ -0.84
TDP1-210ENST00000554976 ODR4Q5SWX8 454 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 SPRYD7Q5W111 196 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 TAS1R3Q7RTX0 852 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 OLIG1Q8TAK6 271 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 CPLX3Q8WVH0 158 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 SPIRE2Q8WWL2 714 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 SLC10A4Q96EP9 437 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 EDEM3Q9BZQ6 932 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 GBA2Q9HCG7 927 aaPredicted RBP9.79□□□□□ -0.84
TDP1-210ENST00000554976 DDX41Q9UJV9 622 aaKnown RBP9.79□□□□□ -0.84
TDP1-210ENST00000554976 ADGRA3Q8IWK6 1321 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 PDHXO00330 501 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 USO1O60763 962 aaKnown RBP9.79□□□□□ -0.84
TDP1-210ENST00000554976 CETPP11597 493 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 HGSNATQ68CP4 663 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 SWSAP1Q6NVH7 229 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 MIS18BP1Q6P0N0 1132 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 CYP26C1Q6V0L0 522 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 CYFIP1Q7L576 1253 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 TMTC1Q8IUR5 882 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 FAM178BQ8IXR5 827 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 TMEM161BQ8NDZ6 487 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 MYRIPQ8NFW9 859 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 OR8K1Q8NGG5 319 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 ATP6V0A1Q93050 837 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 MMP19Q99542 508 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 SH2D3AQ9BRG2 576 aa9.79□□□□□ -0.84
TDP1-210ENST00000554976 ZHX3Q9H4I2 956 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms