RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	TTLL11	Q8NHH1	800 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	SPATA25	Q9BR10	227 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	C14orf93	Q9H972	538 aa	Known RBP	7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	TRPC5	Q9UL62	973 aa	Predicted RBP	7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	SRPK3	Q9UPE1	567 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	MRPL42	Q9Y6G3	142 aa	Known RBP	7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	PIK3C2G	O75747	1445 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	SPATA31A3	Q5VYP0	1347 aa		7.27	□□□□□ -1.25
PSMC6-208	ENST00000554956	ANKRD30B	Q9BXX2	1392 aa		7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	TCRBV16S1A1N1	A0A5B0	115 aa		7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	ZNF561-AS1	K7EIQ3	104 aa		7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	KCNQ2	O43526	872 aa		7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	SAFB2	Q14151	953 aa	Known RBP eCLIP	7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	PAN2	Q504Q3	1202 aa	Known RBP	7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	FBLN7	Q53RD9	439 aa		7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	PHF19	Q5T6S3	580 aa		7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	C16orf59	Q7L2K0	433 aa		7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	MARCH10	Q8NA82	808 aa	Predicted RBP	7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	FEZF2	Q8TBJ5	459 aa		7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	KCNC2	Q96PR1	638 aa		7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	SMURF1	Q9HCE7	757 aa		7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	NGRN	Q9NPE2	291 aa	Known RBP	7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	YTHDC2	Q9H6S0	1430 aa	Known RBP	7.26	□□□□□ -1.25
PSMC6-208	ENST00000554956	SH3D21	A4FU49	640 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	BTBD11	A6QL63	1104 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	ACOT7	O00154	380 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	INHBB	P09529	407 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	FAH	P16930	419 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	EPHA5	P54756	1037 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	SLURP1	P55000	103 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	C21orf62-AS1	Q17RA5	79 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	FAM47C	Q5HY64	1035 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	FSTL4	Q6MZW2	842 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	KRT28	Q7Z3Y7	464 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	PRAM1	Q96QH2	718 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	ZCCHC4	Q9H5U6	513 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	CDC42BPG	Q6DT37	1551 aa		7.25	□□□□□ -1.25
PSMC6-208	ENST00000554956	PPL	O60437	1756 aa		7.24	□□□□□ -1.25
PSMC6-208	ENST00000554956	FAM90A27P	A6NNH2	459 aa		7.24	□□□□□ -1.25
PSMC6-208	ENST00000554956	SMARCA5	O60264	1052 aa	Predicted RBP	7.24	□□□□□ -1.25
PSMC6-208	ENST00000554956	DNAJC8	O75937	253 aa	Predicted RBP	7.24	□□□□□ -1.25
PSMC6-208	ENST00000554956	ZNF460	Q14592	562 aa		7.24	□□□□□ -1.25
PSMC6-208	ENST00000554956	CRY1	Q16526	586 aa		7.24	□□□□□ -1.25
PSMC6-208	ENST00000554956	UNC5CL	Q8IV45	518 aa		7.24	□□□□□ -1.25
PSMC6-208	ENST00000554956	CARF	Q8N187	725 aa		7.24	□□□□□ -1.25
PSMC6-208	ENST00000554956	PCDH18	Q9HCL0	1135 aa		7.24	□□□□□ -1.25
PSMC6-208	ENST00000554956	PARD6A	Q9NPB6	346 aa		7.24	□□□□□ -1.25
PSMC6-208	ENST00000554956	FANCL	Q9NW38	375 aa		7.24	□□□□□ -1.25
PSMC6-208	ENST00000554956	NUB1	Q9Y5A7	615 aa		7.24	□□□□□ -1.25
PSMC6-208	ENST00000554956	KIF1B	O60333	1816 aa		7.24	□□□□□ -1.25
PSMC6-208	ENST00000554956	SLIT2	O94813	1529 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	FAM83G	A6ND36	823 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	SDS	P20132	328 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	TKFC	Q3LXA3	575 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	FNDC3B	Q53EP0	1204 aa	Known RBP	7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	FIGN	Q5HY92	759 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	BTBD8	Q5XKL5	378 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	CD276	Q5ZPR3	534 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	TTLL6	Q8N841	843 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	IGSF22	Q8N9C0	903 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	CELF4	Q9BZC1	486 aa	Known RBP	7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	RIC8B	Q9NVN3	520 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	NTM	Q9P121	344 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	CROT	Q9UKG9	612 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	CD2AP	Q9Y5K6	639 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	TNPO3	Q9Y5L0	923 aa	Known RBP	7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	RALGAPB	Q86X10	1494 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	NRXN1	Q9ULB1	1477 aa		7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	COL22A1	Q8NFW1	1626 aa	Predicted RBP	7.23	□□□□□ -1.25
PSMC6-208	ENST00000554956	PTPN1	P18031	435 aa	Known RBP	7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	RPL13	P26373	211 aa	Known RBP	7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	SARS	P49591	514 aa	Known RBP	7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	PABPC4	Q13310	644 aa	Known RBP eCLIP	7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	SEC23A	Q15436	765 aa		7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	TM4SF20	Q53R12	229 aa		7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	PRR31	Q5SQ13	230 aa		7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	CPZ	Q66K79	652 aa		7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	VASN	Q6EMK4	673 aa		7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	TTLL7	Q6ZT98	887 aa		7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	OVCH1	Q7RTY7	1134 aa		7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	DEFB132	Q7Z7B7	95 aa		7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	SP8	Q8IXZ3	490 aa		7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	ZDHHC14	Q8IZN3	488 aa		7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	PDGFD	Q9GZP0	370 aa	Predicted RBP	7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	LUC7L	Q9NQ29	371 aa	Known RBP	7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	HSPBP1	Q9NZL4	362 aa		7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	ATP23	Q9Y6H3	246 aa		7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	SRCAP	Q6ZRS2	3230 aa		7.22	□□□□□ -1.25
PSMC6-208	ENST00000554956	RAB3GAP2	Q9H2M9	1393 aa		7.21	□□□□□ -1.25
PSMC6-208	ENST00000554956	OTOL1	A6NHN0	477 aa	Predicted RBP	7.21	□□□□□ -1.26
PSMC6-208	ENST00000554956	DDX3X	O00571	662 aa	Known RBP eCLIP	7.21	□□□□□ -1.26
PSMC6-208	ENST00000554956	GSTA4	O15217	222 aa		7.21	□□□□□ -1.26
PSMC6-208	ENST00000554956	LACTB	P83111	547 aa	Predicted RBP	7.21	□□□□□ -1.26
PSMC6-208	ENST00000554956	TMEM177	Q53S58	311 aa		7.21	□□□□□ -1.26
PSMC6-208	ENST00000554956	TTLL10	Q6ZVT0	673 aa		7.21	□□□□□ -1.26
PSMC6-208	ENST00000554956	HOMER1	Q86YM7	354 aa		7.21	□□□□□ -1.26
PSMC6-208	ENST00000554956	NLGN4X	Q8N0W4	816 aa		7.21	□□□□□ -1.26
PSMC6-208	ENST00000554956	DTX3	Q8N9I9	347 aa		7.21	□□□□□ -1.26
PSMC6-208	ENST00000554956	CLIC6	Q96NY7	704 aa		7.21	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms