RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 KIFAP3Q92845 792 aa15.93■□□□□ 0.14
SHOX2-206ENST00000554685 PARVGQ9HBI0 331 aa15.93■□□□□ 0.14
SHOX2-206ENST00000554685 ZNF286BP0CG31 522 aa15.92■□□□□ 0.14
SHOX2-206ENST00000554685 HSPA1AP0DMV8 641 aaKnown RBP15.92■□□□□ 0.14
SHOX2-206ENST00000554685 HSPA1BP0DMV9 641 aaKnown RBP15.92■□□□□ 0.14
SHOX2-206ENST00000554685 TBC1D8BQ0IIM8 1120 aa15.92■□□□□ 0.14
SHOX2-206ENST00000554685 HERC4Q5GLZ8 1057 aaPredicted RBP15.92■□□□□ 0.14
SHOX2-206ENST00000554685 GNASQ5JWF2 1037 aa15.92■□□□□ 0.14
SHOX2-206ENST00000554685 FAM26FQ5R3K3 315 aa15.92■□□□□ 0.14
SHOX2-206ENST00000554685 STXBP4Q6ZWJ1 553 aa15.92■□□□□ 0.14
SHOX2-206ENST00000554685 RNF180Q86T96 592 aa15.92■□□□□ 0.14
SHOX2-206ENST00000554685 PCSK9Q8NBP7 692 aaKnown RBP15.92■□□□□ 0.14
SHOX2-206ENST00000554685 SLC17A8Q8NDX2 589 aa15.92■□□□□ 0.14
SHOX2-206ENST00000554685 ZHX3Q9H4I2 956 aa15.92■□□□□ 0.14
SHOX2-206ENST00000554685 DHX33Q9H6R0 707 aaKnown RBP15.92■□□□□ 0.14
SHOX2-206ENST00000554685 C17orf75Q9HAS0 396 aa15.92■□□□□ 0.14
SHOX2-206ENST00000554685 LARSQ9P2J5 1176 aaKnown RBP15.92■□□□□ 0.14
SHOX2-206ENST00000554685 NPHP3-ACAD11A0A0J9YXS1 232 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 TMEM150BA6NC51 233 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 RRN3P2A6NIE6 340 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 MAGEB2O15479 319 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 HIP1RO75146 1068 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 ADAMTS4O75173 837 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 ZNF131P52739 623 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 RAD51AP2Q09MP3 1159 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 MFSD10Q14728 455 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 EMC2Q15006 297 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 ANO6Q4KMQ2 910 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 COBLL1Q53SF7 1204 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 FBXO46Q6PJ61 603 aaPredicted RBP15.91■□□□□ 0.14
SHOX2-206ENST00000554685 RETREG2Q8NC44 543 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 TCP11Q8WWU5 503 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 MTG1Q9BT17 334 aaPredicted RBP15.91■□□□□ 0.14
SHOX2-206ENST00000554685 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.91■□□□□ 0.148e-6■■□□□ 13.3
SHOX2-206ENST00000554685 OLFML3Q9NRN5 406 aa15.91■□□□□ 0.14
SHOX2-206ENST00000554685 MYH9P35579 1960 aaKnown RBP15.9■□□□□ 0.14
SHOX2-206ENST00000554685 MAFO75444 373 aaPredicted RBP15.9■□□□□ 0.14
SHOX2-206ENST00000554685 CABYRO75952 493 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 PGK1P00558 417 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 MAPTP10636 758 aaKnown RBP15.9■□□□□ 0.14
SHOX2-206ENST00000554685 SCP2P22307 547 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 ABCD1P33897 745 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 PSEN2P49810 448 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 RTP1P59025 263 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 PURAQ00577 322 aaKnown RBP15.9■□□□□ 0.14
SHOX2-206ENST00000554685 BEX3Q00994 111 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 EHHADHQ08426 723 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 PPFIA1Q13136 1202 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 ALCAMQ13740 583 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 DPCR1Q3MIW9 517 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 FAM102BQ5T8I3 360 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 ISM2Q6H9L7 571 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 MYCT1Q8N699 235 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 SH3TC2Q8TF17 1288 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 IFT74Q96LB3 600 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 BPIFA3Q9BQP9 254 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 DNAJC25Q9H1X3 360 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 RNPEPQ9H4A4 650 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 PDLIM7Q9NR12 457 aa15.9■□□□□ 0.14
SHOX2-206ENST00000554685 H0YCG3 227 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 HAS3O00219 553 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 PSMA7O14818 248 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 GNAT1P11488 350 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 PLS3P13797 630 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 INSRRP14616 1297 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 ERCC5P28715 1186 aaPredicted RBP15.89■□□□□ 0.13
SHOX2-206ENST00000554685 DNM2P50570 870 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 LBX1P52954 281 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 MAPK7Q13164 816 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 PPP2R5AQ15172 486 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 KIAA0753Q2KHM9 967 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 ODR4Q5SWX8 454 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 IER5Q5VY09 327 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 SFR1Q86XK3 245 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 FAM178BQ8IXR5 827 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 ARRDC4Q8NCT1 418 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 KLHDC9Q8NEP7 349 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 FAM200AQ8TCP9 573 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 CEP89Q96ST8 783 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 SH2D3AQ9BRG2 576 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 TSEN34Q9BSV6 310 aaKnown RBP15.89■□□□□ 0.13
SHOX2-206ENST00000554685 NRCAMQ92823 1304 aa15.89■□□□□ 0.13
SHOX2-206ENST00000554685 MOXD2PA6NHM9 499 aa15.88■□□□□ 0.13
SHOX2-206ENST00000554685 RSPH10B2B2RC85 870 aa15.88■□□□□ 0.13
SHOX2-206ENST00000554685 RSPH10BP0C881 870 aa15.88■□□□□ 0.13
SHOX2-206ENST00000554685 BMP6P22004 513 aa15.88■□□□□ 0.13
SHOX2-206ENST00000554685 TMOD1P28289 359 aa15.88■□□□□ 0.13
SHOX2-206ENST00000554685 ZNF165P49910 485 aa15.88■□□□□ 0.13
SHOX2-206ENST00000554685 SMTNP53814 917 aa15.88■□□□□ 0.13
SHOX2-206ENST00000554685 DMP1Q13316 513 aaPredicted RBP15.88■□□□□ 0.13
SHOX2-206ENST00000554685 GRIK4Q16099 956 aa15.88■□□□□ 0.13
SHOX2-206ENST00000554685 MAEAQ7L5Y9 396 aa15.88■□□□□ 0.13
SHOX2-206ENST00000554685 GUF1Q8N442 669 aaKnown RBP15.88■□□□□ 0.13
SHOX2-206ENST00000554685 KAT2BQ92831 832 aa15.88■□□□□ 0.13
SHOX2-206ENST00000554685 POLR3FQ9H1D9 316 aaPredicted RBP15.88■□□□□ 0.13
SHOX2-206ENST00000554685 MRPL44Q9H9J2 332 aaKnown RBP15.88■□□□□ 0.13
SHOX2-206ENST00000554685 SLC39A2Q9NP94 309 aa15.88■□□□□ 0.13
SHOX2-206ENST00000554685 XPNPEP1Q9NQW7 623 aa15.88■□□□□ 0.13
SHOX2-206ENST00000554685 UBE4BO95155 1302 aa15.88■□□□□ 0.13
SHOX2-206ENST00000554685 WDR81Q562E7 1941 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms