RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CDHR2Q9BYE9 1310 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 FAM187AA6NFU0 413 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 CHRNA3P32297 505 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 ART3Q13508 389 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 THOC5Q13769 683 aaKnown RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 BEND6Q5SZJ8 279 aaPredicted RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 ERICH1Q86X53 443 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 ST13P4Q8IZP2 240 aaPredicted RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 TTC13Q8NBP0 860 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 RPS6KC1Q96S38 1066 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 CYTH2Q99418 400 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 TMEM47Q9BQJ4 181 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 TRAIPQ9BWF2 469 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 DNAJC17Q9NVM6 304 aaKnown RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 AKT3Q9Y243 479 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 ANGPTL3Q9Y5C1 460 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 CDC42BPGQ6DT37 1551 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 BCORL1Q5H9F3 1711 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 CLRN2A0PK11 232 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 LDHAP00338 332 aaKnown RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 CD58P19256 250 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 BZW1Q7L1Q6 419 aaKnown RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 PSPC1Q8WXF1 523 aaKnown RBP14.95□□□□□ -0.02
VTI1B-204ENST00000554659 CAPN11Q9UMQ6 739 aa14.95□□□□□ -0.02
VTI1B-204ENST00000554659 ZRANB2O95218 330 aaKnown RBP eCLIP14.94□□□□□ -0.02
VTI1B-204ENST00000554659 MYO1EQ12965 1108 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 GRM4Q14833 912 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 MTERF2Q49AM1 385 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 NBPF10Q6P3W6 841 aaKnown RBP14.94□□□□□ -0.02
VTI1B-204ENST00000554659 SRRM1Q8IYB3 904 aaKnown RBP14.94□□□□□ -0.02
VTI1B-204ENST00000554659 PIGBQ92521 554 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 CENPKQ9BS16 269 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 KCNF1Q9H3M0 494 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 GOLGA8IPA6NC78 632 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 GOLGA8JA6NMD2 632 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 HDLBPQ00341 1268 aaKnown RBP14.94□□□□□ -0.02
VTI1B-204ENST00000554659 SPOPLQ6IQ16 392 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 FAM96AQ9H5X1 160 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 YY1AP1Q9H869 796 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 A2ML1A8K2U0 1454 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 USP42Q9H9J4 1324 aaKnown RBP14.94□□□□□ -0.02
VTI1B-204ENST00000554659 KIF28PB7ZC32 967 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 NCF2P19878 526 aaPredicted RBP14.94□□□□□ -0.02
VTI1B-204ENST00000554659 ATP2C1P98194 919 aaPredicted RBP14.94□□□□□ -0.02
VTI1B-204ENST00000554659 DEUP1Q05D60 604 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 HDAC6Q9UBN7 1215 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 COPEO14579 308 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 CTIFO43310 598 aaKnown RBP14.94□□□□□ -0.02
VTI1B-204ENST00000554659 CDR2Q01850 454 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 KCNB1Q14721 858 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 FAM47CQ5HY64 1035 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 CLEC4GQ6UXB4 293 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 TMEM179Q6ZVK1 233 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 EPM2AIP1Q7L775 607 aaPredicted RBP14.94□□□□□ -0.02
VTI1B-204ENST00000554659 CEP70Q8NHQ1 597 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 ZCCHC17Q9NP64 241 aaKnown RBP14.94□□□□□ -0.02
VTI1B-204ENST00000554659 ADAM22Q9P0K1 906 aa14.94□□□□□ -0.02
VTI1B-204ENST00000554659 TARBP1Q13395 1621 aaKnown RBP14.94□□□□□ -0.02
VTI1B-204ENST00000554659 PSMA2P25787 234 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 HOXA13P31271 388 aaPredicted RBP14.93□□□□□ -0.02
VTI1B-204ENST00000554659 JAK3P52333 1124 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 TXNRD1Q16881 649 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 KNOP1Q1ED39 458 aaKnown RBP14.93□□□□□ -0.02
VTI1B-204ENST00000554659 KLHL38Q2WGJ6 581 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 WDR75Q8IWA0 830 aaKnown RBP14.93□□□□□ -0.02
VTI1B-204ENST00000554659 XXYLT1Q8NBI6 393 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 NRBF2Q96F24 287 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 FAM20AQ96MK3 541 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 MSTO1Q9BUK6 570 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 KIAA1586Q9HCI6 787 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 PCDHA6Q9UN73 950 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 PCDHA8Q9Y5H6 950 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 PALLDQ8WX93 1383 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 SPAG7O75391 227 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 CCZ1BP86790 482 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 CCZ1P86791 482 aaPredicted RBP14.93□□□□□ -0.02
VTI1B-204ENST00000554659 IQCB1Q15051 598 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 TMEM259Q4ZIN3 620 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 WDR24Q96S15 920 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 KLC2Q9H0B6 622 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 GSTA4O15217 222 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 GYG2O15488 501 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 NCK2O43639 380 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 ATP1A1P05023 1023 aaKnown RBP14.93□□□□□ -0.02
VTI1B-204ENST00000554659 RFX1P22670 979 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 SH3RF3Q8TEJ3 882 aaPredicted RBP14.93□□□□□ -0.02
VTI1B-204ENST00000554659 NUDCD1Q96RS6 583 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 VIPAS39Q9H9C1 493 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 ZC4H2Q9NQZ6 224 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 A0A0G2JND7 137 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 PEX3P56589 373 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 HIPK4Q8NE63 616 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 APOL6Q9BWW8 343 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 EPC1Q9H2F5 836 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 LIMA1Q9UHB6 759 aaKnown RBP14.93□□□□□ -0.02
VTI1B-204ENST00000554659 NPHP4O75161 1426 aaPredicted RBP14.93□□□□□ -0.02
VTI1B-204ENST00000554659 USP17L5A8MUK1 530 aa14.93□□□□□ -0.02
VTI1B-204ENST00000554659 EXOSC10Q01780 885 aaKnown RBP14.93□□□□□ -0.02
VTI1B-204ENST00000554659 METTL16Q86W50 562 aaKnown RBP14.93□□□□□ -0.02
VTI1B-204ENST00000554659 FAM193BQ96PV7 902 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms