RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 VCPIP1Q96JH7 1222 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 FAM81BQ96LP2 452 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 NLRP3Q96P20 1036 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 C11orf84Q9BUA3 381 aaPredicted RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 PNPLA8Q9NP80 782 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 CCDC66A2RUB6 948 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 GOLGA6L4A6NEF3 574 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 USP17L5A8MUK1 530 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 KBTBD13C9JR72 458 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 F5H6K3 240 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 PPP1R12AO14974 1030 aaPredicted RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 SLITRK3O94933 977 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 FCER1AP12319 257 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 ACO1P21399 889 aaKnown RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 KLRC2P26717 231 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 GABRB2P47870 512 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 KLK7P49862 253 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 ADCY7P51828 1080 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 TNK2Q07912 1038 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 CTTNQ14247 550 aaKnown RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 DBN1Q16643 649 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 KIAA1755Q5JYT7 1200 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 ERMARDQ5T6L9 678 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 RRAGBQ5VZM2 374 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 TMEM179Q6ZVK1 233 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF720Q7Z2F6 126 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 CATSPER3Q86XQ3 398 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 CASKIN2Q8WXE0 1202 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 SHC3Q92529 594 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 HPS3Q969F9 1004 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 RRP36Q96EU6 259 aaKnown RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 EYA3Q99504 573 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 FRMD8P1Q9BZ68 369 aaPredicted RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 IRX2Q9BZI1 471 aaPredicted RBP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 PPCSQ9HAB8 311 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 NAGPAQ9UK23 515 aa3.79□□□□□ -1.8
SEC23A-207ENST00000554615 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.79□□□□□ -1.8
SEC23A-207ENST00000554615 RBM47A0AV96 593 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 LRRC53A6NM62 1247 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 KRT86O43790 486 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 IDH1O75874 414 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 KIF4AO95239 1232 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 AKR1B1P15121 316 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 PSMA3P25788 255 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 MAGEA3P43357 314 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 IRAK1P51617 712 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 TARBP2Q15633 366 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 KNOP1Q1ED39 458 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 PPP1R2P3Q6NXS1 205 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 CRELD2Q6UXH1 353 aaPredicted RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 CCT6BQ92526 530 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 DDX12PQ92771 950 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 TATDN2Q93075 761 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 ROPN1BQ9BZX4 212 aaPredicted RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 EPN3Q9H201 632 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 KAT14Q9H8E8 782 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 ROPN1Q9HAT0 212 aaPredicted RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 WRAP73Q9P2S5 460 aaPredicted RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 LUC7L2Q9Y383 392 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 AFF2P51816 1311 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 COL4A3Q01955 1670 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 FAM86B1E9PN63 330 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 F8W031 263 aaPredicted RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 MSH4O15457 936 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 SART1O43290 800 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 SORBS3O60504 671 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 SEC31AO94979 1220 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 FAM86B2P0C5J1 330 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 KRT9P35527 623 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 STAT6P42226 847 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 MRPL12P52815 198 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 ERVK-9P63128 1117 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 PTK6Q13882 451 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF174Q15697 407 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 ZNF827Q17R98 1081 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 FAM83BQ5T0W9 1011 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 LRRC38Q5VT99 294 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 ANKS1BQ7Z6G8 1248 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 C4orf19Q8IY42 314 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 REXO1Q8N1G1 1221 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 PLEKHO2Q8TD55 490 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 HELQQ8TDG4 1101 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 NIFKQ9BYG3 293 aaKnown RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 TAF1DQ9H5J8 278 aaPredicted RBP3.78□□□□□ -1.8
SEC23A-207ENST00000554615 EBF2Q9HAK2 575 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 ANKEF1Q9NU02 776 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 WHRNQ9P202 907 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 PLXNA2O75051 1894 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 CTAGE15A4D2H0 777 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 USP17L3A6NCW0 530 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 USP17L4A6NCW7 530 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 SMCO2A6NFE2 343 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 B4DLN1 442 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 SNAP23O00161 211 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 BIN1O00499 593 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 NPHP1O15259 732 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 SERPINC1P01008 464 aa3.78□□□□□ -1.8
SEC23A-207ENST00000554615 DHRS4L1P0CG22 281 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms