RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 DHX32Q7L7V1 743 aaKnown RBP27.49■■□□□ 1.99
FOXA1-204ENST00000554607 SUSD6Q92537 303 aa27.49■■□□□ 1.99
FOXA1-204ENST00000554607 RPGRIP1Q96KN7 1286 aa27.49■■□□□ 1.99
FOXA1-204ENST00000554607 CEP131Q9UPN4 1083 aa27.49■■□□□ 1.99
FOXA1-204ENST00000554607 EVPLQ92817 2033 aa27.48■■□□□ 1.99
FOXA1-204ENST00000554607 ZBTB42B2RXF5 422 aa27.48■■□□□ 1.99
FOXA1-204ENST00000554607 FSCN2O14926 492 aa27.48■■□□□ 1.99
FOXA1-204ENST00000554607 HOXA2O43364 376 aa27.48■■□□□ 1.99
FOXA1-204ENST00000554607 C22orf31O95567 290 aa27.48■■□□□ 1.99
FOXA1-204ENST00000554607 PTPN5P54829 565 aa27.48■■□□□ 1.99
FOXA1-204ENST00000554607 TMEM184AQ6ZMB5 413 aa27.48■■□□□ 1.99
FOXA1-204ENST00000554607 FAM228AQ86W67 206 aa27.48■■□□□ 1.99
FOXA1-204ENST00000554607 METTL13Q8N6R0 699 aa27.48■■□□□ 1.99
FOXA1-204ENST00000554607 OSMRQ99650 979 aa27.48■■□□□ 1.99
FOXA1-204ENST00000554607 ZNF577Q9BSK1 485 aa27.48■■□□□ 1.99
FOXA1-204ENST00000554607 CWH43Q9H720 699 aa27.48■■□□□ 1.99
FOXA1-204ENST00000554607 BRPF3Q9ULD4 1205 aa27.48■■□□□ 1.99
FOXA1-204ENST00000554607 MAFBQ9Y5Q3 323 aaPredicted RBP27.48■■□□□ 1.99
FOXA1-204ENST00000554607 GOLGA8AA7E2F4 631 aa27.47■■□□□ 1.99
FOXA1-204ENST00000554607 GOLGA8BA8MQT2 603 aa27.47■■□□□ 1.99
FOXA1-204ENST00000554607 ATP4AP20648 1035 aa27.47■■□□□ 1.99
FOXA1-204ENST00000554607 SETQ01105 290 aaPredicted RBP27.47■■□□□ 1.99
FOXA1-204ENST00000554607 PLCB3Q01970 1234 aa27.47■■□□□ 1.99
FOXA1-204ENST00000554607 JAKMIP3Q5VZ66 844 aa27.47■■□□□ 1.99
FOXA1-204ENST00000554607 ZNF746Q6NUN9 644 aaPredicted RBP27.47■■□□□ 1.99
FOXA1-204ENST00000554607 SMAP1Q8IYB5 467 aaPredicted RBP27.47■■□□□ 1.99
FOXA1-204ENST00000554607 ZNF710Q8N1W2 664 aa27.47■■□□□ 1.99
FOXA1-204ENST00000554607 MRPS27Q92552 414 aaKnown RBP27.47■■□□□ 1.99
FOXA1-204ENST00000554607 TMEM117Q9H0C3 514 aa27.47■■□□□ 1.99
FOXA1-204ENST00000554607 TCEAL9Q9UHQ7 104 aa27.47■■□□□ 1.99
FOXA1-204ENST00000554607 IGLV3-22A0A075B6J6 115 aa27.46■■□□□ 1.99
FOXA1-204ENST00000554607 MAGEB2O15479 319 aa27.46■■□□□ 1.99
FOXA1-204ENST00000554607 GPR32O75388 356 aa27.46■■□□□ 1.99
FOXA1-204ENST00000554607 PSAPP07602 524 aa27.46■■□□□ 1.99
FOXA1-204ENST00000554607 FGFR1P11362 822 aa27.46■■□□□ 1.99
FOXA1-204ENST00000554607 RCAN1P53805 252 aa27.46■■□□□ 1.99
FOXA1-204ENST00000554607 SIGLEC14Q08ET2 396 aa27.46■■□□□ 1.99
FOXA1-204ENST00000554607 FBXL6Q8N531 539 aa27.46■■□□□ 1.99
FOXA1-204ENST00000554607 VN1R2Q8NFZ6 395 aa27.46■■□□□ 1.99
FOXA1-204ENST00000554607 RASGRP4Q8TDF6 673 aa27.46■■□□□ 1.99
FOXA1-204ENST00000554607 PPP1R16BQ96T49 567 aa27.46■■□□□ 1.99
FOXA1-204ENST00000554607 NGRNQ9NPE2 291 aaKnown RBP27.46■■□□□ 1.99
FOXA1-204ENST00000554607 VTNP04004 478 aa27.45■■□□□ 1.98
FOXA1-204ENST00000554607 DSC3Q14574 896 aa27.45■■□□□ 1.98
FOXA1-204ENST00000554607 PRSS33Q8NF86 280 aa27.45■■□□□ 1.98
FOXA1-204ENST00000554607 CRYGNQ8WXF5 182 aa27.45■■□□□ 1.98
FOXA1-204ENST00000554607 PCDHA10Q9Y5I2 948 aa27.45■■□□□ 1.98
FOXA1-204ENST00000554607 KLF18A0A0U1RQI7 1052 aa27.44■■□□□ 1.98
FOXA1-204ENST00000554607 ZSCAN20P17040 1043 aaPredicted RBP27.44■■□□□ 1.98
FOXA1-204ENST00000554607 TMOD1P28289 359 aa27.44■■□□□ 1.98
FOXA1-204ENST00000554607 PPM1AP35813 382 aa27.44■■□□□ 1.98
FOXA1-204ENST00000554607 RBM10P98175 930 aaKnown RBP27.44■■□□□ 1.98
FOXA1-204ENST00000554607 KRT17Q04695 432 aa27.44■■□□□ 1.98
FOXA1-204ENST00000554607 PFKFB3Q16875 520 aaPredicted RBP27.44■■□□□ 1.98
FOXA1-204ENST00000554607 TSGA10IPQ3SY00 556 aa27.44■■□□□ 1.98
FOXA1-204ENST00000554607 IER5LQ5T953 404 aa27.44■■□□□ 1.98
FOXA1-204ENST00000554607 PLPP4Q5VZY2 271 aa27.44■■□□□ 1.98
FOXA1-204ENST00000554607 CCDC12Q8WUD4 166 aaPredicted RBP27.44■■□□□ 1.98
FOXA1-204ENST00000554607 FAM167AQ96KS9 214 aa27.44■■□□□ 1.98
FOXA1-204ENST00000554607 TCEANC2Q96MN5 208 aa27.44■■□□□ 1.98
FOXA1-204ENST00000554607 TCF25Q9BQ70 676 aa27.44■■□□□ 1.98
FOXA1-204ENST00000554607 ENTPD7Q9NQZ7 604 aa27.44■■□□□ 1.98
FOXA1-204ENST00000554607 HCSTQ9UBK5 93 aa27.44■■□□□ 1.98
FOXA1-204ENST00000554607 MYH9P35579 1960 aaKnown RBP27.43■■□□□ 1.98
FOXA1-204ENST00000554607 CCDC196A0A1B0GTZ2 297 aa27.43■■□□□ 1.98
FOXA1-204ENST00000554607 ESYT2A0FGR8 921 aa27.43■■□□□ 1.98
FOXA1-204ENST00000554607 TECP42680 631 aa27.43■■□□□ 1.98
FOXA1-204ENST00000554607 KCNC3Q14003 757 aa27.43■■□□□ 1.98
FOXA1-204ENST00000554607 KRT32Q14532 448 aa27.43■■□□□ 1.98
FOXA1-204ENST00000554607 ANKRD54Q6NXT1 300 aa27.43■■□□□ 1.98
FOXA1-204ENST00000554607 ABI1Q8IZP0 508 aa27.43■■□□□ 1.98
FOXA1-204ENST00000554607 MAP7D2Q96T17 732 aa27.43■■□□□ 1.98
FOXA1-204ENST00000554607 S1PR5Q9H228 398 aa27.43■■□□□ 1.98
FOXA1-204ENST00000554607 C6orf50Q9HD87 102 aa27.43■■□□□ 1.98
FOXA1-204ENST00000554607 FAM217BQ9NTX9 383 aaPredicted RBP27.43■■□□□ 1.98
FOXA1-204ENST00000554607 HOXB8P17481 243 aaPredicted RBP27.42■■□□□ 1.98
FOXA1-204ENST00000554607 CDC27P30260 824 aa27.42■■□□□ 1.98
FOXA1-204ENST00000554607 KCNT2Q6UVM3 1135 aa27.42■■□□□ 1.98
FOXA1-204ENST00000554607 TRMT1LQ7Z2T5 733 aaKnown RBP27.42■■□□□ 1.98
FOXA1-204ENST00000554607 LRRC43Q8N309 656 aa27.42■■□□□ 1.98
FOXA1-204ENST00000554607 ZNF558Q96NG5 402 aa27.42■■□□□ 1.98
FOXA1-204ENST00000554607 CASD1Q96PB1 797 aa27.42■■□□□ 1.98
FOXA1-204ENST00000554607 ZMYND12Q9H0C1 365 aa27.42■■□□□ 1.98
FOXA1-204ENST00000554607 GABBR1Q9UBS5 961 aa27.42■■□□□ 1.98
FOXA1-204ENST00000554607 AKT3Q9Y243 479 aa27.42■■□□□ 1.98
FOXA1-204ENST00000554607 HMGB1P09429 215 aaKnown RBP27.41■■□□□ 1.98
FOXA1-204ENST00000554607 NLRP11P59045 1033 aaKnown RBP27.41■■□□□ 1.98
FOXA1-204ENST00000554607 IRX6P78412 446 aaPredicted RBP27.41■■□□□ 1.98
FOXA1-204ENST00000554607 APOBRQ0VD83 1088 aa27.41■■□□□ 1.98
FOXA1-204ENST00000554607 PTPN21Q16825 1174 aa27.41■■□□□ 1.98
FOXA1-204ENST00000554607 EFCAB12Q6NXP0 572 aa27.41■■□□□ 1.98
FOXA1-204ENST00000554607 REXO1Q8N1G1 1221 aaKnown RBP27.41■■□□□ 1.98
FOXA1-204ENST00000554607 NAP1L2Q9ULW6 460 aaPredicted RBP27.41■■□□□ 1.98
FOXA1-204ENST00000554607 SAMM50Q9Y512 469 aa27.41■■□□□ 1.98
FOXA1-204ENST00000554607 EIF4BP23588 611 aaKnown RBP27.4■■□□□ 1.98
FOXA1-204ENST00000554607 GNA11P29992 359 aa27.4■■□□□ 1.98
FOXA1-204ENST00000554607 CLCN3P51790 818 aa27.4■■□□□ 1.98
FOXA1-204ENST00000554607 LRRC55Q6ZSA7 311 aa27.4■■□□□ 1.98
FOXA1-204ENST00000554607 TMC7Q7Z402 723 aa27.4■■□□□ 1.98
FOXA1-204ENST00000554607 NRBP2Q9NSY0 501 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms