RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 MYH16Q9H6N6 1097 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 CNNM2Q9H8M5 875 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 TMOD2Q9NZR1 351 aa6.1□□□□□ -1.43
ATXN3-228ENST00000554592 RBBP6Q7Z6E9 1792 aaKnown RBP6.09□□□□□ -1.43
ATXN3-228ENST00000554592 ADGRA2Q96PE1 1338 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 A0A1W2PQH9 124 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 BIN1O00499 593 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 ACRP10323 421 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 GUCY2CP25092 1073 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 GYG1P46976 350 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 CACNB3P54284 484 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 FOXO4P98177 505 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 MOGSQ13724 837 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 CCDC57Q2TAC2 916 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 ARSHQ5FYA8 562 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 TAF7LQ5H9L4 462 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 FAM109BQ6ICB4 259 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-228ENST00000554592 APOBEC3HQ6NTF7 200 aaKnown RBP6.09□□□□□ -1.43
ATXN3-228ENST00000554592 FASTKD5Q7L8L6 764 aaKnown RBP6.09□□□□□ -1.43
ATXN3-228ENST00000554592 TMPRSS7Q7RTY8 843 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 TSPYL5Q86VY4 417 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-228ENST00000554592 TDHQ8IZJ6 230 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 CELF2-AS1Q8N7Q2 184 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 LINS1Q8NG48 757 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 TEKT1Q969V4 418 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 ZDHHC15Q96MV8 337 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 TM9SF2Q99805 663 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 ASPNQ9BXN1 380 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 ZSWIM4Q9H7M6 989 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 CNNM1Q9NRU3 951 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 ZNF112Q9UJU3 913 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 ZMYND8Q9ULU4 1186 aaPredicted RBP6.09□□□□□ -1.43
ATXN3-228ENST00000554592 GABRQQ9UN88 632 aa6.09□□□□□ -1.43
ATXN3-228ENST00000554592 BRCA2P51587 3418 aa6.09□□□□□ -1.44
ATXN3-228ENST00000554592 SHISA3A0PJX4 238 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-228ENST00000554592 TNPO2O14787 897 aaKnown RBP6.08□□□□□ -1.44
ATXN3-228ENST00000554592 CYP2C8P10632 490 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 NME1P15531 152 aaKnown RBP6.08□□□□□ -1.44
ATXN3-228ENST00000554592 TPP2P29144 1249 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-228ENST00000554592 GDNFP39905 211 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 MAGEA10P43363 369 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-228ENST00000554592 PPP2R5EQ16537 467 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 FYB2Q5VWT5 728 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 OGFOD2Q6N063 350 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 HHIPL2Q6UWX4 724 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 LMBR1LQ6UX01 489 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 G2E3Q7L622 706 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 NLRC3Q7RTR2 1065 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 TTC6Q86TZ1 520 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 C7orf61Q8IZ16 206 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 PHACTR4Q8IZ21 702 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 TAB3Q8N5C8 712 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-228ENST00000554592 TSPYL6Q8N831 410 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 C19orf47Q8N9M1 422 aaKnown RBP6.08□□□□□ -1.44
ATXN3-228ENST00000554592 FAM151AQ8WW52 585 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 DNAAF4Q8WXU2 420 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 COA7Q96BR5 231 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 SLC9A7Q96T83 725 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 TRIM55Q9BYV6 548 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 ACTR10Q9NZ32 417 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 SLC45A1Q9Y2W3 748 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 SUGT1Q9Y2Z0 365 aa6.08□□□□□ -1.44
ATXN3-228ENST00000554592 R3HCC1Q9Y3T6 440 aaKnown RBP6.08□□□□□ -1.44
ATXN3-228ENST00000554592 CENPFP49454 3210 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 RPTORQ8N122 1335 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 APAF1O14727 1248 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 FRAT2O75474 233 aaPredicted RBP6.07□□□□□ -1.44
ATXN3-228ENST00000554592 POLR2BP30876 1174 aaKnown RBP6.07□□□□□ -1.44
ATXN3-228ENST00000554592 BMS1Q14692 1282 aaKnown RBP6.07□□□□□ -1.44
ATXN3-228ENST00000554592 ZYXQ15942 572 aaKnown RBP6.07□□□□□ -1.44
ATXN3-228ENST00000554592 CAVIN4Q5BKX8 364 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 RALGPS1Q5JS13 557 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 NOL9Q5SY16 702 aaKnown RBP6.07□□□□□ -1.44
ATXN3-228ENST00000554592 GIMAP6Q6P9H5 292 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 POU5F2Q8N7G0 328 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 MICAL1Q8TDZ2 1067 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 FAM168AQ92567 244 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.07□□□□□ -1.441e-11■■■■□ 25.2
ATXN3-228ENST00000554592 C11orf49Q9H6J7 331 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 ST7Q9NRC1 585 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 SIRPGQ9P1W8 387 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 KCNH3Q9ULD8 1083 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 ZHX2Q9Y6X8 837 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 CEP290O15078 2479 aa6.07□□□□□ -1.44
ATXN3-228ENST00000554592 MYBBP1AQ9BQG0 1328 aaKnown RBP6.06□□□□□ -1.44
ATXN3-228ENST00000554592 DNAJC25-GNG10A0A024R161 153 aa6.06□□□□□ -1.44
ATXN3-228ENST00000554592 A0A0G2JLL6 359 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-228ENST00000554592 ZNF503-AS2A6NEH8 195 aa6.06□□□□□ -1.44
ATXN3-228ENST00000554592 TNFRSF10CO14798 259 aa6.06□□□□□ -1.44
ATXN3-228ENST00000554592 SYN1P17600 705 aa6.06□□□□□ -1.44
ATXN3-228ENST00000554592 GBP1P32455 592 aa6.06□□□□□ -1.44
ATXN3-228ENST00000554592 CHAF1AQ13111 956 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-228ENST00000554592 TWISTNBQ3B726 338 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-228ENST00000554592 LARP1BQ659C4 914 aaKnown RBP6.06□□□□□ -1.44
ATXN3-228ENST00000554592 UNC5AQ6ZN44 842 aa6.06□□□□□ -1.44
ATXN3-228ENST00000554592 PRRT2Q7Z6L0 340 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-228ENST00000554592 NOP9Q86U38 636 aaKnown RBP6.06□□□□□ -1.44
ATXN3-228ENST00000554592 SMCR8Q8TEV9 937 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-228ENST00000554592 DIS3LQ8TF46 1054 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms