RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 KIAA2012Q0VF49 1180 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 MTA1Q13330 715 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 CR1LQ2VPA4 569 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 POMZP3Q6PJE2 187 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 ANKRD23Q86SG2 305 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 ZC3H18Q86VM9 953 aaKnown RBP5.36□□□□□ -1.55
ATXN3-227ENST00000554491 NLRP10Q86W26 655 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 NT5DC4Q86YG4 428 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 FAM126BQ8IXS8 530 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 NGEFQ8N5V2 710 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 TTLL6Q8N841 843 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 SEC14L1Q92503 715 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 PPP1R14AQ96A00 147 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 C1QTNF3Q9BXJ4 246 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 NKX2-4Q9H2Z4 354 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 PCDH18Q9HCL0 1135 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 PRDM11Q9NQV5 511 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 CYP26B1Q9NR63 512 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 ST6GALNAC2Q9UJ37 374 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 FBXL7Q9UJT9 491 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 NUB1Q9Y5A7 615 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 KIAA0232Q92628 1395 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 ANKARQ7Z5J8 1434 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 CICQ96RK0 1608 aaPredicted RBP5.36□□□□□ -1.55
ATXN3-227ENST00000554491 BTAF1O14981 1849 aa5.36□□□□□ -1.55
ATXN3-227ENST00000554491 ZNF536O15090 1300 aa5.35□□□□□ -1.55
ATXN3-227ENST00000554491 C1QTNF3-AMACRE9PGA6 284 aa5.35□□□□□ -1.55
ATXN3-227ENST00000554491 NOP56O00567 594 aaKnown RBP5.35□□□□□ -1.55
ATXN3-227ENST00000554491 ZSCAN20P17040 1043 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-227ENST00000554491 BCL6P41182 706 aa5.35□□□□□ -1.55
ATXN3-227ENST00000554491 SLC6A11P48066 632 aa5.35□□□□□ -1.55
ATXN3-227ENST00000554491 HDLBPQ00341 1268 aaKnown RBP5.35□□□□□ -1.55
ATXN3-227ENST00000554491 ADAM9Q13443 819 aa5.35□□□□□ -1.55
ATXN3-227ENST00000554491 SLC15A2Q16348 729 aa5.35□□□□□ -1.55
ATXN3-227ENST00000554491 CEP68Q76N32 757 aa5.35□□□□□ -1.55
ATXN3-227ENST00000554491 FAM124AQ86V42 546 aa5.35□□□□□ -1.55
ATXN3-227ENST00000554491 TTC9BQ8N6N2 239 aa5.35□□□□□ -1.55
ATXN3-227ENST00000554491 JMYQ8N9B5 988 aa5.35□□□□□ -1.55
ATXN3-227ENST00000554491 BTN2A2Q8WVV5 523 aa5.35□□□□□ -1.55
ATXN3-227ENST00000554491 ANAPC16Q96DE5 110 aa5.35□□□□□ -1.55
ATXN3-227ENST00000554491 MRVI1Q9Y6F6 885 aa5.35□□□□□ -1.55
ATXN3-227ENST00000554491 TRPM1Q7Z4N2 1603 aa5.34□□□□□ -1.55
ATXN3-227ENST00000554491 COL5A2P05997 1499 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-227ENST00000554491 BCL9O00512 1426 aa5.34□□□□□ -1.55
ATXN3-227ENST00000554491 B4GALT3O60512 393 aa5.34□□□□□ -1.55
ATXN3-227ENST00000554491 VAMP1P23763 118 aa5.34□□□□□ -1.55
ATXN3-227ENST00000554491 RPL11P62913 178 aaKnown RBP5.34□□□□□ -1.55
ATXN3-227ENST00000554491 MROH9Q5TGP6 573 aa5.34□□□□□ -1.55
ATXN3-227ENST00000554491 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
ATXN3-227ENST00000554491 BORAQ6PGQ7 559 aa5.34□□□□□ -1.55
ATXN3-227ENST00000554491 RIOX2Q8IUF8 465 aa5.34□□□□□ -1.55
ATXN3-227ENST00000554491 CRACR2BQ8N4Y2 399 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-227ENST00000554491 MSL3Q8N5Y2 521 aaKnown RBP5.34□□□□□ -1.55
ATXN3-227ENST00000554491 FRAT1Q92837 279 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-227ENST00000554491 ZSWIM3Q96MP5 696 aa5.34□□□□□ -1.55
ATXN3-227ENST00000554491 FAM210AQ96ND0 272 aa5.34□□□□□ -1.55
ATXN3-227ENST00000554491 CEP83Q9Y592 693 aa5.34□□□□□ -1.55
ATXN3-227ENST00000554491 TIMM13Q9Y5L4 95 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-227ENST00000554491 X6R8D5 127 aa5.34□□□□□ -1.55
ATXN3-227ENST00000554491 NUP155O75694 1391 aa5.33□□□□□ -1.56
ATXN3-227ENST00000554491 FSHBP01225 129 aa5.33□□□□□ -1.56
ATXN3-227ENST00000554491 ZNF28P17035 718 aa5.33□□□□□ -1.56
ATXN3-227ENST00000554491 ECI1P42126 302 aa5.33□□□□□ -1.56
ATXN3-227ENST00000554491 ZNF143P52747 638 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-227ENST00000554491 SF1Q15637 639 aaKnown RBP5.33□□□□□ -1.56
ATXN3-227ENST00000554491 TXNRD1Q16881 649 aa5.33□□□□□ -1.56
ATXN3-227ENST00000554491 GLB1LQ6UWU2 654 aa5.33□□□□□ -1.56
ATXN3-227ENST00000554491 NOL8Q76FK4 1167 aaKnown RBP5.33□□□□□ -1.56
ATXN3-227ENST00000554491 Q8N1Y9 231 aa5.33□□□□□ -1.56
ATXN3-227ENST00000554491 TCP11L2Q8N4U5 519 aa5.33□□□□□ -1.56
ATXN3-227ENST00000554491 SLC16A11Q8NCK7 471 aa5.33□□□□□ -1.56
ATXN3-227ENST00000554491 TRMT2BQ96GJ1 504 aaKnown RBP5.33□□□□□ -1.56
ATXN3-227ENST00000554491 LCORQ96JN0 433 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-227ENST00000554491 PAIP2Q9BPZ3 127 aaKnown RBP5.33□□□□□ -1.56
ATXN3-227ENST00000554491 MYH16Q9H6N6 1097 aa5.33□□□□□ -1.56
ATXN3-227ENST00000554491 PKD1L3Q7Z443 1732 aa5.33□□□□□ -1.56
ATXN3-227ENST00000554491 GPRASP1Q5JY77 1395 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 ABCC11Q96J66 1382 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 TNRC6CQ9HCJ0 1690 aaKnown RBP5.32□□□□□ -1.56
ATXN3-227ENST00000554491 ITGAVP06756 1048 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 NKX3-2P78367 333 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 ICAM4Q14773 271 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 NCAPHQ15003 741 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 CDSNQ15517 529 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 CHRNA2Q15822 529 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 PRSS53Q2L4Q9 553 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 PRAMEF18Q5VWM3 479 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 IQCEQ6IPM2 695 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 PTF1AQ7RTS3 328 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 SPRED1Q7Z699 444 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 NME8Q8N427 588 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 ARRDC4Q8NCT1 418 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 KREMEN2Q8NCW0 462 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 CHST13Q8NET6 341 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 DIO2Q92813 273 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 DVL3Q92997 716 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-227ENST00000554491 ITFG2Q969R8 447 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 MBD6Q96DN6 1003 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 TMEM169Q96HH4 297 aa5.32□□□□□ -1.56
ATXN3-227ENST00000554491 SEC16BQ96JE7 1060 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms