RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ZCCHC4Q9H5U6 513 aa7.03□□□□□ -1.28
SCFD1-211ENST00000554437 BARX1Q9HBU1 254 aaPredicted RBP7.03□□□□□ -1.28
SCFD1-211ENST00000554437 FBXO10Q9UK96 956 aa7.03□□□□□ -1.28
SCFD1-211ENST00000554437 ATP8A1Q9Y2Q0 1164 aa7.03□□□□□ -1.28
SCFD1-211ENST00000554437 ZDHHC9Q9Y397 364 aa7.03□□□□□ -1.28
SCFD1-211ENST00000554437 NOC2LQ9Y3T9 749 aaKnown RBP7.03□□□□□ -1.28
SCFD1-211ENST00000554437 COL4A3BPQ9Y5P4 624 aa7.03□□□□□ -1.28
SCFD1-211ENST00000554437 LCHNA4D1U4 455 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 MROH6A6NGR9 719 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 C9orf118A6NHY6 69 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 PRPF6O94906 941 aaKnown RBP7.02□□□□□ -1.29
SCFD1-211ENST00000554437 POLD1P28340 1107 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 SESN3P58005 492 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 AMPD3Q01432 767 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 ADCY2Q08462 1091 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 MOGSQ13724 837 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 MYBPC3Q14896 1274 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 PTPROQ16827 1216 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 IQSEC1Q6DN90 963 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 GRAMD4Q6IC98 578 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 Q6ZUG5 572 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 FRMD7Q6ZUT3 714 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 FAM124AQ86V42 546 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 ZNF496Q96IT1 587 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-211ENST00000554437 MYL10Q9BUA6 226 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 USP40Q9NVE5 1235 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 USP36Q9P275 1121 aaKnown RBP7.02□□□□□ -1.29
SCFD1-211ENST00000554437 CDC42EP3Q9UKI2 254 aa7.02□□□□□ -1.29
SCFD1-211ENST00000554437 ADAMTS20P59510 1910 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 GPR39O43194 453 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 NOBOXO60393 691 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 KIAA2012Q0VF49 1180 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 NFATC3Q12968 1075 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 NOLC1Q14978 699 aaKnown RBP eCLIP7.01□□□□□ -1.29
SCFD1-211ENST00000554437 RNF219Q5W0B1 726 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-211ENST00000554437 ESPNLQ6ZVH7 1005 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 RASSF3Q86WH2 238 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 SPATS2Q86XZ4 545 aaKnown RBP7.01□□□□□ -1.29
SCFD1-211ENST00000554437 KLHL36Q8N4N3 616 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 CLRN3Q8NCR9 226 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 FEZF2Q8TBJ5 459 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 RPGRQ92834 1020 aaKnown RBP7.01□□□□□ -1.29
SCFD1-211ENST00000554437 KCNC2Q96PR1 638 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 ZDHHC5Q9C0B5 715 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 SEMA4AQ9H3S1 761 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 PCDH12Q9NPG4 1184 aa7.01□□□□□ -1.29
SCFD1-211ENST00000554437 A0A0G2JNJ9 132 aa7□□□□□ -1.29
SCFD1-211ENST00000554437 KDM1AO60341 852 aa7□□□□□ -1.29
SCFD1-211ENST00000554437 CUTAO60888 179 aa7□□□□□ -1.29
SCFD1-211ENST00000554437 IBSPP21815 317 aaPredicted RBP7□□□□□ -1.29
SCFD1-211ENST00000554437 KCNQ1P51787 676 aa7□□□□□ -1.29
SCFD1-211ENST00000554437 MAP3K12Q12852 859 aa7□□□□□ -1.29
SCFD1-211ENST00000554437 TOP3AQ13472 1001 aaPredicted RBP7□□□□□ -1.29
SCFD1-211ENST00000554437 IFNL2Q8IZJ0 200 aa7□□□□□ -1.29
SCFD1-211ENST00000554437 ZDHHC14Q8IZN3 488 aa7□□□□□ -1.29
SCFD1-211ENST00000554437 FERMT2Q96AC1 680 aa7□□□□□ -1.29
SCFD1-211ENST00000554437 Q9UFV3 132 aa7□□□□□ -1.29
SCFD1-211ENST00000554437 KCNG1Q9UIX4 513 aa7□□□□□ -1.29
SCFD1-211ENST00000554437 ELL2O00472 640 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-211ENST00000554437 HMGCRP04035 888 aa6.99□□□□□ -1.29
SCFD1-211ENST00000554437 NCLP19338 710 aaKnown RBP6.99□□□□□ -1.29
SCFD1-211ENST00000554437 BCAR1P56945 870 aa6.99□□□□□ -1.29
SCFD1-211ENST00000554437 TMEM200BQ69YZ2 307 aa6.99□□□□□ -1.29
SCFD1-211ENST00000554437 KIAA1841Q6NSI8 718 aa6.99□□□□□ -1.29
SCFD1-211ENST00000554437 UNQ6494/PRO21346Q6UXR6 183 aa6.99□□□□□ -1.29
SCFD1-211ENST00000554437 KANSL1Q7Z3B3 1105 aa6.99□□□□□ -1.29
SCFD1-211ENST00000554437 REXO1L1PQ8IX06 675 aa6.99□□□□□ -1.29
SCFD1-211ENST00000554437 AJUBAQ96IF1 538 aa6.99□□□□□ -1.29
SCFD1-211ENST00000554437 KATNBL1Q9H079 304 aa6.99□□□□□ -1.29
SCFD1-211ENST00000554437 PARD6AQ9NPB6 346 aa6.99□□□□□ -1.29
SCFD1-211ENST00000554437 MAGEL2Q9UJ55 1249 aa6.99□□□□□ -1.29
SCFD1-211ENST00000554437 ADAM29Q9UKF5 820 aa6.99□□□□□ -1.29
SCFD1-211ENST00000554437 OTOL1A6NHN0 477 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-211ENST00000554437 MAFGO15525 162 aa6.98□□□□□ -1.29
SCFD1-211ENST00000554437 CDK11BP21127 795 aaKnown RBP6.98□□□□□ -1.29
SCFD1-211ENST00000554437 ETV4P43268 484 aa6.98□□□□□ -1.29
SCFD1-211ENST00000554437 EIF4HQ15056 248 aaKnown RBP6.98□□□□□ -1.29
SCFD1-211ENST00000554437 BORAQ6PGQ7 559 aa6.98□□□□□ -1.29
SCFD1-211ENST00000554437 GPR155Q7Z3F1 870 aa6.98□□□□□ -1.29
SCFD1-211ENST00000554437 COG1Q8WTW3 980 aa6.98□□□□□ -1.29
SCFD1-211ENST00000554437 MBD6Q96DN6 1003 aa6.98□□□□□ -1.29
SCFD1-211ENST00000554437 GPATCH3Q96I76 525 aa6.98□□□□□ -1.29
SCFD1-211ENST00000554437 CARD11Q9BXL7 1154 aa6.98□□□□□ -1.29
SCFD1-211ENST00000554437 ANO3Q9BYT9 981 aa6.98□□□□□ -1.29
SCFD1-211ENST00000554437 VTA1Q9NP79 307 aa6.98□□□□□ -1.29
SCFD1-211ENST00000554437 TOPORSQ9NS56 1045 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-211ENST00000554437 KCMF1Q9P0J7 381 aa6.98□□□□□ -1.29
SCFD1-211ENST00000554437 PHLDB1Q86UU1 1377 aa6.97□□□□□ -1.29
SCFD1-211ENST00000554437 ST20-MTHFSA0A0A6YYL1 179 aa6.97□□□□□ -1.29
SCFD1-211ENST00000554437 MAFO75444 373 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-211ENST00000554437 CSF2RBP32927 897 aa6.97□□□□□ -1.29
SCFD1-211ENST00000554437 CDKN1CP49918 316 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-211ENST00000554437 STAT5BP51692 787 aa6.97□□□□□ -1.29
SCFD1-211ENST00000554437 FAPQ12884 760 aa6.97□□□□□ -1.29
SCFD1-211ENST00000554437 USP10Q14694 798 aaKnown RBP6.97□□□□□ -1.29
SCFD1-211ENST00000554437 DGKDQ16760 1214 aa6.97□□□□□ -1.29
SCFD1-211ENST00000554437 RALYLQ86SE5 291 aaKnown RBP6.97□□□□□ -1.29
SCFD1-211ENST00000554437 CXorf67Q86X51 503 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-211ENST00000554437 KBTBD2Q8IY47 623 aa6.97□□□□□ -1.29
SCFD1-211ENST00000554437 RTKN2Q8IZC4 609 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms