RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 POLD1P28340 1107 aa18.39■□□□□ 0.53
PPP4R3A-202ENST00000554390 GALNT17Q6IS24 598 aa18.39■□□□□ 0.53
PPP4R3A-202ENST00000554390 MICAL1Q8TDZ2 1067 aa18.39■□□□□ 0.53
PPP4R3A-202ENST00000554390 NOP53Q9NZM5 478 aaKnown RBP18.39■□□□□ 0.53
PPP4R3A-202ENST00000554390 AGAP1Q9UPQ3 857 aa18.39■□□□□ 0.53
PPP4R3A-202ENST00000554390 ROBO1Q9Y6N7 1651 aa18.39■□□□□ 0.53
PPP4R3A-202ENST00000554390 ABCB4P21439 1286 aa18.39■□□□□ 0.53
PPP4R3A-202ENST00000554390 PIGWQ7Z7B1 504 aa18.39■□□□□ 0.53
PPP4R3A-202ENST00000554390 JMJD4Q9H9V9 463 aa18.39■□□□□ 0.53
PPP4R3A-202ENST00000554390 CEP72Q9P209 647 aa18.39■□□□□ 0.53
PPP4R3A-202ENST00000554390 CFAP73A6NFT4 308 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 ENO4A6NNW6 628 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 PLA2G4BP0C869 781 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 MAP2K1Q02750 393 aaPredicted RBP18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 LRRC63Q05C16 580 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 ZNF268Q14587 947 aaPredicted RBP18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 ITIH4Q14624 930 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 ASIC2Q16515 512 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 C16orf86Q6ZW13 317 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 TRPM8Q7Z2W7 1104 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 ACTRT1Q8TDG2 376 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 ELAC2Q9BQ52 826 aaKnown RBP18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 SELENOSQ9BQE4 189 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 DDX4Q9NQI0 724 aaKnown RBP18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 EMILIN3Q9NT22 766 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 CES2O00748 559 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 ASAP2O43150 1006 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 MED24O75448 989 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 PDE6BP35913 854 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 KCNJ2P63252 427 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 GTF2IP78347 998 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 COBLL1Q53SF7 1204 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 MIS18BP1Q6P0N0 1132 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 LRRC34Q8IZ02 419 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 RBM46Q8TBY0 533 aaKnown RBP18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 PBKQ96KB5 322 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 CD209Q9NNX6 404 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 ATP8A1Q9Y2Q0 1164 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 PCDHB13Q9Y5F0 798 aa18.38■□□□□ 0.53
PPP4R3A-202ENST00000554390 COL22A1Q8NFW1 1626 aaPredicted RBP18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 PVALEFA0A1B0GWK0 134 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 SMNDC1O75940 238 aaKnown RBP eCLIP18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 FGFR1OPO95684 399 aaKnown RBP18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 USP11P51784 963 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 ZCWPW2Q504Y3 356 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 SH3GL3Q99963 347 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 TRIM51Q9BSJ1 452 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 KCNMB3Q9NPA1 279 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 NOC2LQ9Y3T9 749 aaKnown RBP18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 PCDHAC2Q9Y5I4 1007 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 ABCB11O95342 1321 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 C6orf229H3BNL8 230 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 KRIT1O00522 736 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 TTI1O43156 1089 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 ICA1Q05084 483 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 USH1GQ495M9 461 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 UBAP2Q5T6F2 1119 aaKnown RBP18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 OSGEPQ9NPF4 335 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 SAMD15Q9P1V8 674 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 STK17AQ9UEE5 414 aa18.37■□□□□ 0.53
PPP4R3A-202ENST00000554390 PGRMC1O00264 195 aaKnown RBP18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 ZBTB39O15060 712 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 RHBDL3P58872 404 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 ZNF211Q13398 564 aaPredicted RBP18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 AADACL2Q6P093 401 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 SYN2Q92777 582 aaPredicted RBP18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 CALR3Q96L12 384 aaKnown RBP18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 NUCKS1Q9H1E3 243 aaKnown RBP18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 ABCF3Q9NUQ8 709 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 FXR2P51116 673 aaKnown RBP eCLIP18.36■□□□□ 0.537e-14■■■□□ 16.1
PPP4R3A-202ENST00000554390 SLMAPQ14BN4 828 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 ARSHQ5FYA8 562 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 METTL13Q8N6R0 699 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 CYP2W1Q8TAV3 490 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 PARD3BQ8TEW8 1205 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 ATXN2LQ8WWM7 1075 aaKnown RBP18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 P2RX7Q99572 595 aaKnown RBP18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.36■□□□□ 0.531e-6■■□□□ 13.6
PPP4R3A-202ENST00000554390 MTFR1LQ9H019 292 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 SEPT11Q9NVA2 429 aaKnown RBP18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 MTMR4Q9NYA4 1195 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 MYH4Q9Y623 1939 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 KLHL33A6NCF5 533 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 NQO1P15559 274 aaKnown RBP18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 TCP10Q12799 353 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 AP1ARQ63HQ0 302 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 TRIM59Q8IWR1 403 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 PRCCQ92733 491 aaPredicted RBP18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 GGT7Q9UJ14 662 aa18.36■□□□□ 0.53
PPP4R3A-202ENST00000554390 COL14A1Q05707 1796 aaKnown RBP18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 IRS2Q9Y4H2 1338 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 GFPT2O94808 682 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 ALADP13716 330 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 ALDH5A1P51649 535 aaPredicted RBP18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 TBC1D10BQ4KMP7 808 aaPredicted RBP18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 PRR16Q569H4 304 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 SLC10A5Q5PT55 438 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 ZBTB10Q96DT7 871 aa18.35■□□□□ 0.53
PPP4R3A-202ENST00000554390 SLC5A4Q9NY91 659 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms