RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 HERVK_113P62684 666 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 NEXNQ0ZGT2 675 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 COL9A2Q14055 689 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-226ENST00000554350 KCTD2Q14681 263 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 FBLN7Q53RD9 439 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 EPHA10Q5JZY3 1008 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 PRAMEF13Q5VWM6 474 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 MFSD5Q6N075 450 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 C16orf59Q7L2K0 433 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 OTOP2Q7RTS6 562 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 HID1Q8IV36 788 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 ARNTL2Q8WYA1 636 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 CNNM1Q9NRU3 951 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 TMOD4Q9NZQ9 345 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 TPX2Q9ULW0 747 aaKnown RBP7.05□□□□□ -1.28
ATXN3-226ENST00000554350 MAP3K2Q9Y2U5 619 aa7.05□□□□□ -1.28
ATXN3-226ENST00000554350 DOCK1Q14185 1865 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 ZNF521Q96K83 1311 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 PHIPQ8WWQ0 1821 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 MED19A0JLT2 244 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-226ENST00000554350 FGBP02675 491 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 KRT1P04264 644 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 CYBAP13498 195 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 SLC5A1P13866 664 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 AFMP43652 599 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 ETF1P62495 437 aaKnown RBP7.04□□□□□ -1.28
ATXN3-226ENST00000554350 IFIT5Q13325 482 aaKnown RBP7.04□□□□□ -1.28
ATXN3-226ENST00000554350 SEPT6Q14141 434 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 CWF19L2Q2TBE0 894 aaKnown RBP7.04□□□□□ -1.28
ATXN3-226ENST00000554350 FAM47AQ5JRC9 791 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 ERICH6BQ5W0A0 696 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 CDC42EP5Q6NZY7 148 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 PRR23BQ6ZRT6 265 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 ZFPM1Q8IX07 1006 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 FAM84BQ96KN1 310 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-226ENST00000554350 PRRX2Q99811 253 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 USP40Q9NVE5 1235 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 FAM53CQ9NYF3 392 aa7.04□□□□□ -1.28
ATXN3-226ENST00000554350 SUPT16HQ9Y5B9 1047 aaKnown RBP7.04□□□□□ -1.28
ATXN3-226ENST00000554350 ZNF536O15090 1300 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 A0A1W2PQ45 241 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-226ENST00000554350 A0A1W2PQY0 241 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 CA3P07451 260 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 GLI1P08151 1106 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 HOXB7P09629 217 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 IL9P15248 144 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 KCNA5P22460 613 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 GNA15P30679 374 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 GDNFP39905 211 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 RPS26P62854 115 aaKnown RBP7.03□□□□□ -1.28
ATXN3-226ENST00000554350 KCNA1Q09470 495 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 LMOD3Q0VAK6 560 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 TCF15Q12870 199 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 PKN1Q16512 942 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 HHIPL2Q6UWX4 724 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 LDHAL6AQ6ZMR3 332 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 RNF180Q86T96 592 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 DPP9Q86TI2 863 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 C1QL4Q86Z23 238 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 NPAS4Q8IUM7 802 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 SUGP1Q8IWZ8 645 aaKnown RBP7.03□□□□□ -1.28
ATXN3-226ENST00000554350 NPLOC4Q8TAT6 608 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 KIRREL1Q96J84 757 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 SLC38A3Q99624 504 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 PNNQ9H307 717 aaKnown RBP7.03□□□□□ -1.28
ATXN3-226ENST00000554350 UBE2ZQ9H832 354 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-226ENST00000554350 PRKRIP1Q9H875 184 aaPredicted RBP7.03□□□□□ -1.28
ATXN3-226ENST00000554350 XPNPEP3Q9NQH7 507 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 RBPJLQ9UBG7 517 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 PCDHA11Q9Y5I1 949 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 SLC4A7Q9Y6M7 1214 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 CHD9Q3L8U1 2897 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 DOCK2Q92608 1830 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 EPG5Q9HCE0 2579 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 REV3LO60673 3130 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 LOC285556D6RIA3 1793 aa7.03□□□□□ -1.28
ATXN3-226ENST00000554350 CHD8Q9HCK8 2581 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 EPOPA6NHQ4 379 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 SLC15A5A6NIM6 579 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 SEPT4O43236 478 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 PGK1P00558 417 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 IGKV5-2P06315 115 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 POU3F3P20264 500 aaPredicted RBP7.02□□□□□ -1.29
ATXN3-226ENST00000554350 RGS3P49796 1198 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 CCNA1P78396 465 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 TNK2Q07912 1038 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 PICALMQ13492 652 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 CAVIN4Q5BKX8 364 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 TMEM67Q5HYA8 995 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 PRAMEF19Q5SWL8 479 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 AGMOQ6ZNB7 445 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 THAP5Q7Z6K1 395 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 FRMD6Q96NE9 622 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 PLEKHF1Q96S99 279 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 MRIQ9BWK5 157 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 IL23AQ9NPF7 189 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 STARD7Q9NQZ5 370 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 TJP2Q9UDY2 1190 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 BRWD1Q9NSI6 2320 aa7.02□□□□□ -1.29
ATXN3-226ENST00000554350 A0A1B0GUL6 1792 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms