RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CACNB2Q08289 660 aaPredicted RBP8.47□□□□□ -1.05
TDP1-209ENST00000554180 RAD51AP2Q09MP3 1159 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 PAK1Q13153 545 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 EMC2Q15006 297 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 PLCB4Q15147 1175 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 PLA2G4FQ68DD2 849 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 ISM2Q6H9L7 571 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 SFR1Q86XK3 245 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 TRIM50Q86XT4 487 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 DHX40Q8IX18 779 aaKnown RBP8.47□□□□□ -1.05
TDP1-209ENST00000554180 SMYD4Q8IYR2 804 aaPredicted RBP8.47□□□□□ -1.05
TDP1-209ENST00000554180 DAW1Q8N136 415 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 KIAA0895Q8NCT3 520 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 RNF214Q8ND24 703 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 TRPV1Q8NER1 839 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 ENOX1Q8TC92 643 aaKnown RBP8.47□□□□□ -1.05
TDP1-209ENST00000554180 KCNN1Q92952 543 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 DHTKD1Q96HY7 919 aaPredicted RBP8.47□□□□□ -1.05
TDP1-209ENST00000554180 CEP89Q96ST8 783 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 C16orf70Q9BSU1 422 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 UPF3AQ9H1J1 476 aaKnown RBP8.47□□□□□ -1.05
TDP1-209ENST00000554180 SPC25Q9HBM1 224 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 PDLIM7Q9NR12 457 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 RWDD2AQ9UIY3 292 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 GDAQ9Y2T3 454 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 SYNRGQ9UMZ2 1314 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 ZSWIM8A7E2V4 1837 aa8.47□□□□□ -1.05
TDP1-209ENST00000554180 TMEM150BA6NC51 233 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 RSPH10B2B2RC85 870 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 ZBTB42B2RXF5 422 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 H0YCG3 227 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 H3BRB1 525 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 MAFO75444 373 aaPredicted RBP8.46□□□□□ -1.06
TDP1-209ENST00000554180 F2P00734 622 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 RSPH10BP0C881 870 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 ZNF286BP0CG31 522 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 RARBP10826 455 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 PLS3P13797 630 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 ELNP15502 786 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 CD44P16070 742 aaKnown RBP8.46□□□□□ -1.06
TDP1-209ENST00000554180 CST5P28325 142 aaPredicted RBP8.46□□□□□ -1.06
TDP1-209ENST00000554180 CACNB1Q02641 598 aaPredicted RBP8.46□□□□□ -1.06
TDP1-209ENST00000554180 LRRC63Q05C16 580 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 TBC1D8BQ0IIM8 1120 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 DMP1Q13316 513 aaPredicted RBP8.46□□□□□ -1.06
TDP1-209ENST00000554180 PPP2R5AQ15172 486 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 FSCN1Q16658 493 aaKnown RBP8.46□□□□□ -1.06
TDP1-209ENST00000554180 BMT2Q1RMZ1 405 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 MTERF2Q49AM1 385 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 ZNF484Q5JVG2 852 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 ODR4Q5SWX8 454 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 EPM2AIP1Q7L775 607 aaPredicted RBP8.46□□□□□ -1.06
TDP1-209ENST00000554180 LUZP1Q86V48 1076 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 MYOCDQ8IZQ8 938 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 MYCT1Q8N699 235 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 AOPEPQ8N6M6 819 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 SPIRE2Q8WWL2 714 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 FIZ1Q96SL8 496 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 KATNAL1Q9BW62 490 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 ST6GALNAC4Q9H4F1 302 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 TUT1Q9H6E5 874 aaKnown RBP8.46□□□□□ -1.06
TDP1-209ENST00000554180 MRPL44Q9H9J2 332 aaKnown RBP8.46□□□□□ -1.06
TDP1-209ENST00000554180 SLC39A2Q9NP94 309 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 XPNPEP1Q9NQW7 623 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 TRPC6Q9Y210 931 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 DOCK5Q9H7D0 1870 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 PCNTO95613 3336 aa8.46□□□□□ -1.06
TDP1-209ENST00000554180 MYH9P35579 1960 aaKnown RBP8.45□□□□□ -1.06
TDP1-209ENST00000554180 IGKV6-21A0A0C4DH24 114 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 RRN3P2A6NIE6 340 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 MAGEB2O15479 319 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 ZEB2O60315 1214 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 PTGS1P23219 599 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 CCNE1P24864 410 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 MARK3P27448 753 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 GRK4P32298 578 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 SMTNP53814 917 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 NCKAP1LP55160 1127 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 NCAPHQ15003 741 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 FAM102BQ5T8I3 360 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 SPATA1Q5VX52 437 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 CENPPQ6IPU0 288 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 KLHL10Q6JEL2 608 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 ZNF720Q7Z2F6 126 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 TRMT1LQ7Z2T5 733 aaKnown RBP8.45□□□□□ -1.06
TDP1-209ENST00000554180 FAM178BQ8IXR5 827 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 DNAJC5GQ8N7S2 189 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 NOC3LQ8WTT2 800 aaKnown RBP8.45□□□□□ -1.06
TDP1-209ENST00000554180 SCFD1Q8WVM8 642 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 TCP11Q8WWU5 503 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 NELFBQ8WX92 580 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 P2RX5Q93086 422 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 LENG1Q96BZ8 264 aaPredicted RBP8.45□□□□□ -1.06
TDP1-209ENST00000554180 HVCN1Q96D96 273 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 SH2D3AQ9BRG2 576 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 NTPCRQ9BSD7 190 aaKnown RBP8.45□□□□□ -1.06
TDP1-209ENST00000554180 ZHX3Q9H4I2 956 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 CTNND2Q9UQB3 1225 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 NFE2L3Q9Y4A8 694 aa8.45□□□□□ -1.06
TDP1-209ENST00000554180 TRIM17Q9Y577 477 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms