RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 RUSC1Q9BVN2 902 aa20.53■□□□□ 0.88
PSEN1-210ENST00000554131 FAM13BQ9NYF5 915 aa20.53■□□□□ 0.88
PSEN1-210ENST00000554131 ARHGEF35A5YM69 484 aa20.52■□□□□ 0.88
PSEN1-210ENST00000554131 POLR2DO15514 142 aaKnown RBP20.52■□□□□ 0.88
PSEN1-210ENST00000554131 DGAT1O75907 488 aa20.52■□□□□ 0.88
PSEN1-210ENST00000554131 MCM6Q14566 821 aa20.52■□□□□ 0.88
PSEN1-210ENST00000554131 EMC2Q15006 297 aa20.52■□□□□ 0.88
PSEN1-210ENST00000554131 ARSHQ5FYA8 562 aa20.52■□□□□ 0.88
PSEN1-210ENST00000554131 RINT1Q6NUQ1 792 aa20.52■□□□□ 0.88
PSEN1-210ENST00000554131 TRAF7Q6Q0C0 670 aa20.52■□□□□ 0.88
PSEN1-210ENST00000554131 PADI6Q6TGC4 694 aa20.52■□□□□ 0.88
PSEN1-210ENST00000554131 C1orf186Q6ZWK4 172 aa20.52■□□□□ 0.88
PSEN1-210ENST00000554131 LRRC71Q8N4P6 559 aa20.52■□□□□ 0.88
PSEN1-210ENST00000554131 ENGASEQ8NFI3 743 aa20.52■□□□□ 0.88
PSEN1-210ENST00000554131 LARP4BQ92615 738 aaKnown RBP20.52■□□□□ 0.88
PSEN1-210ENST00000554131 MTRQ99707 1265 aa20.52■□□□□ 0.88
PSEN1-210ENST00000554131 TANC1Q9C0D5 1861 aa20.52■□□□□ 0.87
PSEN1-210ENST00000554131 LTBP2Q14767 1821 aa20.51■□□□□ 0.87
PSEN1-210ENST00000554131 TNRC18O15417 2968 aaPredicted RBP20.51■□□□□ 0.87
PSEN1-210ENST00000554131 TLR3O15455 904 aaKnown RBP20.51■□□□□ 0.87
PSEN1-210ENST00000554131 ACTN4O43707 911 aaKnown RBP20.51■□□□□ 0.87
PSEN1-210ENST00000554131 USO1O60763 962 aaKnown RBP20.51■□□□□ 0.87
PSEN1-210ENST00000554131 CLTBP09497 229 aa20.51■□□□□ 0.87
PSEN1-210ENST00000554131 CYP11B2P19099 503 aa20.51■□□□□ 0.87
PSEN1-210ENST00000554131 STAT6P42226 847 aa20.51■□□□□ 0.87
PSEN1-210ENST00000554131 CLCN3P51790 818 aa20.51■□□□□ 0.87
PSEN1-210ENST00000554131 SNW1Q13573 536 aaKnown RBP20.51■□□□□ 0.87
PSEN1-210ENST00000554131 EFCAB12Q6NXP0 572 aa20.51■□□□□ 0.87
PSEN1-210ENST00000554131 TAF2Q6P1X5 1199 aa20.51■□□□□ 0.87
PSEN1-210ENST00000554131 RASSF8Q8NHQ8 419 aa20.51■□□□□ 0.87
PSEN1-210ENST00000554131 GBP4Q96PP9 640 aa20.51■□□□□ 0.87
PSEN1-210ENST00000554131 HTATIP2Q9BUP3 242 aa20.51■□□□□ 0.87
PSEN1-210ENST00000554131 NOC4LQ9BVI4 516 aaKnown RBP20.51■□□□□ 0.87
PSEN1-210ENST00000554131 BMP2KQ9NSY1 1161 aaPredicted RBP20.51■□□□□ 0.87
PSEN1-210ENST00000554131 LMBRD1Q9NUN5 540 aa20.51■□□□□ 0.87
PSEN1-210ENST00000554131 TRIM43BA6NCK2 446 aa20.5■□□□□ 0.87
PSEN1-210ENST00000554131 KIAA0355O15063 1070 aa20.5■□□□□ 0.87
PSEN1-210ENST00000554131 PRPF40AO75400 957 aaKnown RBP20.5■□□□□ 0.87
PSEN1-210ENST00000554131 ITGB8P26012 769 aa20.5■□□□□ 0.87
PSEN1-210ENST00000554131 POLGP54098 1239 aaPredicted RBP20.5■□□□□ 0.87
PSEN1-210ENST00000554131 MAPK7Q13164 816 aa20.5■□□□□ 0.87
PSEN1-210ENST00000554131 TPRNQ4KMQ1 711 aa20.5■□□□□ 0.87
PSEN1-210ENST00000554131 FMR1NBQ8N0W7 255 aaPredicted RBP20.5■□□□□ 0.87
PSEN1-210ENST00000554131 IQUBQ8NA54 791 aa20.5■□□□□ 0.87
PSEN1-210ENST00000554131 DNAJB3Q8WWF6 145 aa20.5■□□□□ 0.87
PSEN1-210ENST00000554131 SLC7A3Q8WY07 619 aa20.5■□□□□ 0.87
PSEN1-210ENST00000554131 TRIM43Q96BQ3 446 aaPredicted RBP20.5■□□□□ 0.87
PSEN1-210ENST00000554131 DHX58Q96C10 678 aa20.5■□□□□ 0.87
PSEN1-210ENST00000554131 ATP6V0A4Q9HBG4 840 aa20.5■□□□□ 0.87
PSEN1-210ENST00000554131 KBTBD4Q9NVX7 518 aa20.5■□□□□ 0.87
PSEN1-210ENST00000554131 UMODL1Q5DID0 1318 aa20.5■□□□□ 0.87
PSEN1-210ENST00000554131 LIG1P18858 919 aa20.49■□□□□ 0.87
PSEN1-210ENST00000554131 UBE2HP62256 183 aa20.49■□□□□ 0.87
PSEN1-210ENST00000554131 MGAT3Q09327 533 aa20.49■□□□□ 0.87
PSEN1-210ENST00000554131 LONRF3Q496Y0 759 aa20.49■□□□□ 0.87
PSEN1-210ENST00000554131 DAW1Q8N136 415 aa20.49■□□□□ 0.87
PSEN1-210ENST00000554131 TMEM143Q96AN5 459 aa20.49■□□□□ 0.87
PSEN1-210ENST00000554131 CUEDC2Q9H467 287 aa20.49■□□□□ 0.87
PSEN1-210ENST00000554131 GPRC5CQ9NQ84 441 aa20.49■□□□□ 0.87
PSEN1-210ENST00000554131 PCDH10Q9P2E7 1040 aa20.49■□□□□ 0.87
PSEN1-210ENST00000554131 NOD1Q9Y239 953 aa20.49■□□□□ 0.87
PSEN1-210ENST00000554131 RBAK-RBAKDNI3L0D1 243 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 GAS2O43903 313 aaKnown RBP20.48■□□□□ 0.87
PSEN1-210ENST00000554131 CKBP12277 381 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 GUCY2CP25092 1073 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 ARL2P36404 184 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 SYKP43405 635 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 FAM26DQ5JW98 314 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 GPBP1Q86WP2 473 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 EXOC8Q8IYI6 725 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 C7orf61Q8IZ16 206 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 METTL13Q8N6R0 699 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 RETREG2Q8NC44 543 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 CAGE1Q8TC20 777 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 CCDC43Q96MW1 224 aaKnown RBP20.48■□□□□ 0.87
PSEN1-210ENST00000554131 JPH2Q9BR39 696 aaPredicted RBP20.48■□□□□ 0.87
PSEN1-210ENST00000554131 FAM49AQ9H0Q0 323 aaPredicted RBP20.48■□□□□ 0.87
PSEN1-210ENST00000554131 SUGCTQ9HAC7 445 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 TMEM39AQ9NV64 488 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 KCND2Q9NZV8 630 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 SERTAD1Q9UHV2 236 aa20.48■□□□□ 0.87
PSEN1-210ENST00000554131 NPHP3-ACAD11A0A0J9YXS1 232 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 GOLGA6L4A6NEF3 574 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 MYMKA6NI61 221 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 PITPNM1O00562 1244 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 CAND2O75155 1236 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 GPR32O75388 356 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 CAPN15O75808 1086 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 ZNF202O95125 648 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 VTNP04004 478 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 SSBP05455 408 aaKnown RBP eCLIP20.47■□□□□ 0.87
PSEN1-210ENST00000554131 SLFN14P0C7P3 912 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 DHX8Q14562 1220 aaKnown RBP20.47■□□□□ 0.87
PSEN1-210ENST00000554131 ZNF618Q5T7W0 954 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 IER5Q5VY09 327 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 NME8Q8N427 588 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 MCPH1Q8NEM0 835 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 PYM1Q9BRP8 204 aaKnown RBP20.47■□□□□ 0.87
PSEN1-210ENST00000554131 OSBPL7Q9BZF2 842 aa20.47■□□□□ 0.87
PSEN1-210ENST00000554131 WNT8AQ9H1J5 351 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms