RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 ZNF746Q6NUN9 644 aaPredicted RBP14.02□□□□□ -0.17
VIPAS39-206ENST00000553888 KCTD17Q8N5Z5 321 aa14.02□□□□□ -0.17
VIPAS39-206ENST00000553888 ZSWIM2Q8NEG5 633 aa14.02□□□□□ -0.17
VIPAS39-206ENST00000553888 SLC10A4Q96EP9 437 aa14.02□□□□□ -0.17
VIPAS39-206ENST00000553888 PRIMPOLQ96LW4 560 aa14.02□□□□□ -0.17
VIPAS39-206ENST00000553888 WDR24Q96S15 920 aa14.02□□□□□ -0.17
VIPAS39-206ENST00000553888 NAA15Q9BXJ9 866 aaKnown RBP14.02□□□□□ -0.17
VIPAS39-206ENST00000553888 NLRC4Q9NPP4 1024 aa14.02□□□□□ -0.17
VIPAS39-206ENST00000553888 REXO2Q9Y3B8 237 aaKnown RBP14.02□□□□□ -0.17
VIPAS39-206ENST00000553888 ZSCAN12O43309 604 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 CALUO43852 315 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 STBD1O95210 358 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 SFNP31947 248 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 FAM193AP78312 1265 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 FOXR2Q6PJQ5 311 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 CYP26C1Q6V0L0 522 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 FGD4Q96M96 766 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 ECM2O94769 699 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 CCDC175P0C221 793 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 ACTN1P12814 892 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 PEX3P56589 373 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 KCNH2Q12809 1159 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 NAA30Q147X3 362 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 TMEM63BQ5T3F8 832 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 PPP4R3CPQ6ZMV5 832 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 TMTC1Q8IUR5 882 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 PORCNQ9H237 461 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 RRAGCQ9HB90 399 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 TRIM10Q9UDY6 481 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 PFASO15067 1338 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 EIF3DO15371 548 aaKnown RBP eCLIP14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 SLC16A4O15374 487 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 LYPLA2O95372 231 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 GNPTABQ3T906 1256 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 TCERG1LQ5VWI1 586 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 RDH13Q8NBN7 331 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 BSNDQ8WZ55 320 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 LSM14BQ9BX40 385 aaKnown RBP14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 KCND2Q9NZV8 630 aa14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 SEPT9Q9UHD8 586 aaPredicted RBP14.01□□□□□ -0.17
VIPAS39-206ENST00000553888 PPP1R37O75864 691 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 NOL4O94818 638 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 MARSP56192 900 aaKnown RBP14□□□□□ -0.17
VIPAS39-206ENST00000553888 ETF1P62495 437 aaKnown RBP14□□□□□ -0.17
VIPAS39-206ENST00000553888 ZBED6P86452 979 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 ABHD15Q6UXT9 468 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 RRAGAQ7L523 313 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 PNMA8AQ86V59 439 aaPredicted RBP14□□□□□ -0.17
VIPAS39-206ENST00000553888 FAM133AQ8N9E0 248 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 DNERQ8NFT8 737 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 CEP170P1Q96L14 293 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 PCIF1Q9H4Z3 704 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 EFCC1Q9HA90 598 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 ARMCX3Q9UH62 379 aaPredicted RBP14□□□□□ -0.17
VIPAS39-206ENST00000553888 LRRC53A6NM62 1247 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 EIF3JO75822 258 aaKnown RBP14□□□□□ -0.17
VIPAS39-206ENST00000553888 ATP4AP20648 1035 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 UBA1P22314 1058 aaKnown RBP14□□□□□ -0.17
VIPAS39-206ENST00000553888 PRKCEQ02156 737 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 LY6KQ17RY6 165 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 LRRN4CLQ8ND94 238 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 KIF18AQ8NI77 898 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 IWS1Q96ST2 819 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 STRA6Q9BX79 667 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 AGPAT3Q9NRZ7 376 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 FBXO40Q9UH90 709 aa14□□□□□ -0.17
VIPAS39-206ENST00000553888 MAFGO15525 162 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 GRIN3BO60391 1043 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 ARIH2O95376 493 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 SLC9A1P19634 815 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 GNG11P61952 73 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 SYCP3Q8IZU3 236 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 BAP1Q92560 729 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 SENP7Q9BQF6 1050 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 NUP58Q9BVL2 599 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 SEL1LQ9UBV2 794 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 NFASCO94856 1347 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 NDUFA10O95299 355 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 GNA14O95837 355 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 PSAPP07602 524 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 PLS3P13797 630 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 SNAPC2Q13487 334 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 MTERF2Q49AM1 385 aa13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 EPN1Q9Y6I3 576 aaPredicted RBP13.99□□□□□ -0.17
VIPAS39-206ENST00000553888 SYNGAP1Q96PV0 1343 aa13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 SOCS7O14512 581 aa13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 CCP110O43303 1012 aa13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 POLR2FP61218 127 aaKnown RBP13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 CYP27A1Q02318 531 aa13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 MEA1Q16626 185 aa13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 FASTKD5Q7L8L6 764 aaKnown RBP13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 SMAP1Q8IYB5 467 aaPredicted RBP13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 NEK11Q8NG66 645 aa13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 GBP3Q9H0R5 595 aa13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 NHEJ1Q9H9Q4 299 aaPredicted RBP13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 LARSQ9P2J5 1176 aaKnown RBP13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 USP20Q9Y2K6 914 aa13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 V9GYY5 206 aaPredicted RBP13.98□□□□□ -0.17
VIPAS39-206ENST00000553888 CCDC169A6NNP5 214 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms