RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 CFAP58Q5T655 872 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 ZNF233A6NK53 670 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 SLC16A3O15427 465 aaKnown RBP15.89■□□□□ 0.13
ACTN1-211ENST00000553882 EVI5O60447 810 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 PRKCIP41743 596 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 TNNC1P63316 161 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 C10orf76Q5T2E6 689 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 C1orf186Q6ZWK4 172 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 PEX26Q7Z412 305 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 DAAM2Q86T65 1068 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 VPS36Q86VN1 386 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 DDX42Q86XP3 938 aaKnown RBP eCLIP15.89■□□□□ 0.13
ACTN1-211ENST00000553882 RDH13Q8NBN7 331 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 TPCN2Q8NHX9 752 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 MRIQ9BWK5 157 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.89■□□□□ 0.13
ACTN1-211ENST00000553882 PARVGQ9HBI0 331 aa15.89■□□□□ 0.13
ACTN1-211ENST00000553882 GAS7O60861 476 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 CYP3A4P08684 503 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 H2AFZP0C0S5 128 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 CCT5P48643 541 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 HDLBPQ00341 1268 aaKnown RBP15.88■□□□□ 0.13
ACTN1-211ENST00000553882 PPARDQ03181 441 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 NNTQ13423 1086 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 BTNL9Q6UXG8 535 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 H2AFVQ71UI9 128 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 MAEAQ7L5Y9 396 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 GLYCTKQ8IVS8 523 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 METTL13Q8N6R0 699 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 DDX47Q9H0S4 455 aaKnown RBP15.88■□□□□ 0.13
ACTN1-211ENST00000553882 PKD2L1Q9P0L9 805 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 PSMD10O75832 226 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 ABCB4P21439 1286 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 PSMC2P35998 433 aaKnown RBP15.88■□□□□ 0.13
ACTN1-211ENST00000553882 ERVK-9P63128 1117 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 CBWD6Q4V339 395 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 CBWD3Q5JTY5 395 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 CBWD5Q5RIA9 395 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 FAM178BQ8IXR5 827 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 BORCS6Q96GS4 357 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 RASSF4Q9H2L5 321 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 OSGEPQ9NPF4 335 aa15.88■□□□□ 0.13
ACTN1-211ENST00000553882 SHTN1A0MZ66 631 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 BTNL10A8MVZ5 291 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 DDX39AO00148 427 aaKnown RBP15.87■□□□□ 0.13
ACTN1-211ENST00000553882 PIK3CDO00329 1044 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 PDCLQ13371 301 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 IFI16Q16666 785 aaKnown RBP15.87■□□□□ 0.13
ACTN1-211ENST00000553882 ODR4Q5SWX8 454 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 IQCKQ8N0W5 287 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 BCAS4Q8TDM0 211 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 TMEM59LQ9UK28 342 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 NOC2LQ9Y3T9 749 aaKnown RBP15.87■□□□□ 0.13
ACTN1-211ENST00000553882 STK24Q9Y6E0 443 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 PPP1R12BO60237 982 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-211ENST00000553882 ITGA4P13612 1032 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 GAP43P17677 238 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 HSPA1LP34931 641 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 STAT1P42224 750 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 CC2D2BQ6DHV5 1058 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 BANK1Q8NDB2 785 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 LNX1Q8TBB1 728 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-211ENST00000553882 PIK3R5Q8WYR1 880 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 GRIN2DO15399 1336 aa15.87■□□□□ 0.13
ACTN1-211ENST00000553882 F8VZ95 297 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 H0YIN7 160 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 GCOM1H8Y6P7 765 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-211ENST00000553882 SART1O43290 800 aaKnown RBP15.86■□□□□ 0.13
ACTN1-211ENST00000553882 POLR2MP0CAP2 368 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 ARP10275 920 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 FMO5P49326 533 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 GALCP54803 685 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 DRAP1Q14919 205 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-211ENST00000553882 TRMT1LQ7Z2T5 733 aaKnown RBP15.86■□□□□ 0.13
ACTN1-211ENST00000553882 SEPT11Q9NVA2 429 aaKnown RBP15.86■□□□□ 0.13
ACTN1-211ENST00000553882 TMEM51Q9NW97 253 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 PGRMC1O00264 195 aaKnown RBP15.86■□□□□ 0.13
ACTN1-211ENST00000553882 KRIT1O00522 736 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 LRRN2O75325 713 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 ARHGAP44Q17R89 818 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 HS2ST1Q7LGA3 356 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 ZNF720Q7Z2F6 126 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 MAATS1Q7Z4T9 603 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 CDAN1Q8IWY9 1227 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 FIZ1Q96SL8 496 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 ZNF577Q9BSK1 485 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 CENPHQ9H3R5 247 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 TUFT1Q9NNX1 390 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 FBXO28Q9NVF7 368 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 AMACRQ9UHK6 382 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 DNAJC12Q9UKB3 198 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 ATRNL1Q5VV63 1379 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 SLX4Q8IY92 1834 aa15.86■□□□□ 0.13
ACTN1-211ENST00000553882 EIF3DO15371 548 aaKnown RBP eCLIP15.85■□□□□ 0.13
ACTN1-211ENST00000553882 EIF3HO15372 352 aaKnown RBP eCLIP15.85■□□□□ 0.13
ACTN1-211ENST00000553882 ENTPD3O75355 529 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 PRELPP51888 382 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 CEP55Q53EZ4 464 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
ACTN1-211ENST00000553882 AKT1S1Q96B36 256 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms